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Sampling time-dependent artifacts in single-cell genomics studies.
Massoni-Badosa R, Iacono G, Moutinho C, Kulis M, Palau N, Marchese D, Rodríguez-Ubreva J, Ballestar E, Rodriguez-Esteban G, Marsal S, Aymerich M, Colomer D, Campo E, Julià A, Martín-Subero JI, Heyn H. Massoni-Badosa R, et al. Among authors: ballestar e. Genome Biol. 2020 May 11;21(1):112. doi: 10.1186/s13059-020-02032-0. Genome Biol. 2020. PMID: 32393363 Free PMC article.
Epigenetic inactivation of the Groucho homologue gene TLE1 in hematologic malignancies.
Fraga MF, Berdasco M, Ballestar E, Ropero S, Lopez-Nieva P, Lopez-Serra L, Martín-Subero JI, Calasanz MJ, Lopez de Silanes I, Setien F, Casado S, Fernandez AF, Siebert R, Stifani S, Esteller M. Fraga MF, et al. Among authors: ballestar e. Cancer Res. 2008 Jun 1;68(11):4116-22. doi: 10.1158/0008-5472.CAN-08-0085. Cancer Res. 2008. PMID: 18519670
A robust and highly efficient immune cell reprogramming system.
Bussmann LH, Schubert A, Vu Manh TP, De Andres L, Desbordes SC, Parra M, Zimmermann T, Rapino F, Rodriguez-Ubreva J, Ballestar E, Graf T. Bussmann LH, et al. Among authors: ballestar e. Cell Stem Cell. 2009 Nov 6;5(5):554-66. doi: 10.1016/j.stem.2009.10.004. Cell Stem Cell. 2009. PMID: 19896445 Free article.
Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus.
Javierre BM, Fernandez AF, Richter J, Al-Shahrour F, Martin-Subero JI, Rodriguez-Ubreva J, Berdasco M, Fraga MF, O'Hanlon TP, Rider LG, Jacinto FV, Lopez-Longo FJ, Dopazo J, Forn M, Peinado MA, Carreño L, Sawalha AH, Harley JB, Siebert R, Esteller M, Miller FW, Ballestar E. Javierre BM, et al. Among authors: ballestar e. Genome Res. 2010 Feb;20(2):170-9. doi: 10.1101/gr.100289.109. Epub 2009 Dec 22. Genome Res. 2010. PMID: 20028698 Free PMC article.
A DNA methylation fingerprint of 1628 human samples.
Fernandez AF, Assenov Y, Martin-Subero JI, Balint B, Siebert R, Taniguchi H, Yamamoto H, Hidalgo M, Tan AC, Galm O, Ferrer I, Sanchez-Cespedes M, Villanueva A, Carmona J, Sanchez-Mut JV, Berdasco M, Moreno V, Capella G, Monk D, Ballestar E, Ropero S, Martinez R, Sanchez-Carbayo M, Prosper F, Agirre X, Fraga MF, Graña O, Perez-Jurado L, Mora J, Puig S, Prat J, Badimon L, Puca AA, Meltzer SJ, Lengauer T, Bridgewater J, Bock C, Esteller M. Fernandez AF, et al. Among authors: ballestar e. Genome Res. 2012 Feb;22(2):407-19. doi: 10.1101/gr.119867.110. Epub 2011 May 25. Genome Res. 2012. PMID: 21613409 Free PMC article.
The B cell transcription program mediates hypomethylation and overexpression of key genes in Epstein-Barr virus-associated proliferative conversion.
Hernando H, Shannon-Lowe C, Islam AB, Al-Shahrour F, Rodríguez-Ubreva J, Rodríguez-Cortez VC, Javierre BM, Mangas C, Fernández AF, Parra M, Delecluse HJ, Esteller M, López-Granados E, Fraga MF, López-Bigas N, Ballestar E. Hernando H, et al. Among authors: ballestar e. Genome Biol. 2013 Jan 15;14(1):R3. doi: 10.1186/gb-2013-14-1-r3. Genome Biol. 2013. PMID: 23320978 Free PMC article.
158 results