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Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable.
Mavian C, Pond SK, Marini S, Magalis BR, Vandamme AM, Dellicour S, Scarpino SV, Houldcroft C, Villabona-Arenas J, Paisie TK, Trovão NS, Boucher C, Zhang Y, Scheuermann RH, Gascuel O, Lam TT, Suchard MA, Abecasis A, Wilkinson E, de Oliveira T, Bento AI, Schmidt HA, Martin D, Hadfield J, Faria N, Grubaugh ND, Neher RA, Baele G, Lemey P, Stadler T, Albert J, Crandall KA, Leitner T, Stamatakis A, Prosperi M, Salemi M. Mavian C, et al. Among authors: marini s. Proc Natl Acad Sci U S A. 2020 Jun 9;117(23):12522-12523. doi: 10.1073/pnas.2007295117. Epub 2020 May 7. Proc Natl Acad Sci U S A. 2020. PMID: 32381734 Free PMC article. No abstract available.
Authors' Reply to: Errors in Tracing Coronavirus SARS-CoV-2 Transmission Using a Maximum Likelihood Tree. Comment on "A Snapshot of SARS-CoV-2 Genome Availability up to April 2020 and its Implications: Data Analysis".
Mavian C, Marini S, Prosperi M, Salemi M. Mavian C, et al. Among authors: marini s. JMIR Public Health Surveill. 2020 Nov 11;6(4):e24661. doi: 10.2196/24661. JMIR Public Health Surveill. 2020. PMID: 33174844 Free PMC article. No abstract available.
Brain tissue transcriptomic analysis of SIV-infected macaques identifies several altered metabolic pathways linked to neuropathogenesis and poly (ADP-ribose) polymerases (PARPs) as potential therapeutic targets.
Mavian C, Ramirez-Mata AS, Dollar JJ, Nolan DJ, Cash M, White K, Rich SN, Magalis BR, Marini S, Prosperi MCF, Amador DM, Riva A, Williams KC, Salemi M. Mavian C, et al. Among authors: marini s. J Neurovirol. 2021 Feb;27(1):101-115. doi: 10.1007/s13365-020-00927-z. Epub 2021 Jan 6. J Neurovirol. 2021. PMID: 33405206 Free PMC article.
Earliest detection to date of SARS-CoV-2 in Florida: Identification together with influenza virus on the main entry door of a university building, February 2020.
Lednicky J, Salemi M, Subramaniam K, Waltzek TB, Sabo-Attwood T, Loeb JC, Hentschel S, Tagliamonte MS, Marini S, Alam MM, Stephenson CJ, Elbadry M, Morris JG Jr. Lednicky J, et al. Among authors: marini s. PLoS One. 2021 Jan 13;16(1):e0245352. doi: 10.1371/journal.pone.0245352. eCollection 2021. PLoS One. 2021. PMID: 33439885 Free PMC article.
462 results