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Tryptophan catabolism reflects disease activity in human tuberculosis.
Collins JM, Siddiqa A, Jones DP, Liu K, Kempker RR, Nizam A, Shah NS, Ismail N, Ouma SG, Tukvadze N, Li S, Day CL, Rengarajan J, Brust JC, Gandhi NR, Ernst JD, Blumberg HM, Ziegler TR. Collins JM, et al. Among authors: liu k. JCI Insight. 2020 May 21;5(10):e137131. doi: 10.1172/jci.insight.137131. JCI Insight. 2020. PMID: 32369456 Free PMC article. Clinical Trial.
Computational Metabolomics: A Framework for the Million Metabolome.
Uppal K, Walker DI, Liu K, Li S, Go YM, Jones DP. Uppal K, et al. Among authors: liu k. Chem Res Toxicol. 2016 Dec 19;29(12):1956-1975. doi: 10.1021/acs.chemrestox.6b00179. Epub 2016 Oct 12. Chem Res Toxicol. 2016. PMID: 27629808 Free PMC article. Review.
Metabolic Phenotypes of Response to Vaccination in Humans.
Li S, Sullivan NL, Rouphael N, Yu T, Banton S, Maddur MS, McCausland M, Chiu C, Canniff J, Dubey S, Liu K, Tran V, Hagan T, Duraisingham S, Wieland A, Mehta AK, Whitaker JA, Subramaniam S, Jones DP, Sette A, Vora K, Weinberg A, Mulligan MJ, Nakaya HI, Levin M, Ahmed R, Pulendran B. Li S, et al. Among authors: liu k. Cell. 2017 May 18;169(5):862-877.e17. doi: 10.1016/j.cell.2017.04.026. Epub 2017 May 11. Cell. 2017. PMID: 28502771 Free PMC article.
Integrative metabolomics and transcriptomics signatures of clinical tolerance to Plasmodium vivax reveal activation of innate cell immunity and T cell signaling.
Gardinassi LG, Arévalo-Herrera M, Herrera S, Cordy RJ, Tran V, Smith MR, Johnson MS, Chacko B, Liu KH, Darley-Usmar VM, Go YM; MaHPIC Consortium; Jones DP, Galinski MR, Li S. Gardinassi LG, et al. Redox Biol. 2018 Jul;17:158-170. doi: 10.1016/j.redox.2018.04.011. Epub 2018 Apr 11. Redox Biol. 2018. PMID: 29698924 Free PMC article. Clinical Trial.
High-resolution plasma metabolomics analysis to detect Mycobacterium tuberculosis-associated metabolites that distinguish active pulmonary tuberculosis in humans.
Collins JM, Walker DI, Jones DP, Tukvadze N, Liu KH, Tran VT, Uppal K, Frediani JK, Easley KA, Shenvi N, Khadka M, Ortlund EA, Kempker RR, Blumberg HM, Ziegler TR. Collins JM, et al. Among authors: liu kh. PLoS One. 2018 Oct 11;13(10):e0205398. doi: 10.1371/journal.pone.0205398. eCollection 2018. PLoS One. 2018. PMID: 30308073 Free PMC article.
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