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Lessons learned from an intercalibration exercise on the quantification and characterisation of microplastic particles in sediment and water samples.
Cadiou JF, Gerigny O, Koren Š, Zeri C, Kaberi H, Alomar C, Panti C, Fossi MC, Adamopoulou A, Digka N, Deudero S, Concato M, Carbonell A, Baini M, Galli M, Galgani F. Cadiou JF, et al. Among authors: koren s. Mar Pollut Bull. 2020 May;154:111097. doi: 10.1016/j.marpolbul.2020.111097. Epub 2020 Apr 10. Mar Pollut Bull. 2020. PMID: 32319923
Assessment on marine litter ingested by fish in the Adriatic and NE Ionian Sea macro-region (Mediterranean).
Anastasopoulou A, Kovač Viršek M, Bojanić Varezić D, Digka N, Fortibuoni T, Koren Š, Mandić M, Mytilineou C, Pešić A, Ronchi F, Šiljić J, Torre M, Tsangaris C, Tutman P. Anastasopoulou A, et al. Among authors: koren s. Mar Pollut Bull. 2018 Aug;133:841-851. doi: 10.1016/j.marpolbul.2018.06.050. Epub 2018 Jun 26. Mar Pollut Bull. 2018. PMID: 30041385
The first complete T2T Assemblies of Cattle and Sheep Y-Chromosomes uncover remarkable divergence in structure and gene content.
Smith T, Olagunju T, Rosen B, Neibergs H, Becker G, Davenport K, Elsik C, Hadfield T, Koren S, Kuhn K, Rhie A, Shira K, Skibiel A, Stegemiller M, Thorne J, Villamediana P, Cockett N, Murdoch B. Smith T, et al. Among authors: koren s. Res Sq [Preprint]. 2024 Apr 3:rs.3.rs-4033388. doi: 10.21203/rs.3.rs-4033388/v1. Res Sq. 2024. PMID: 38712074 Free PMC article. Preprint.
Phased nanopore assembly with Shasta and modular graph phasing with GFAse.
Lorig-Roach R, Meredith M, Monlong J, Jain M, Olsen HE, McNulty B, Porubsky D, Montague TG, Lucas JK, Condon C, Eizenga JM, Juul S, McKenzie SK, Simmonds SE, Park J, Asri M, Koren S, Eichler EE, Axel R, Martin B, Carnevali P, Miga KH, Paten B. Lorig-Roach R, et al. Among authors: koren s. Genome Res. 2024 Apr 25;34(3):454-468. doi: 10.1101/gr.278268.123. Genome Res. 2024. PMID: 38627094
The variation and evolution of complete human centromeres.
Logsdon GA, Rozanski AN, Ryabov F, Potapova T, Shepelev VA, Catacchio CR, Porubsky D, Mao Y, Yoo D, Rautiainen M, Koren S, Nurk S, Lucas JK, Hoekzema K, Munson KM, Gerton JL, Phillippy AM, Ventura M, Alexandrov IA, Eichler EE. Logsdon GA, et al. Among authors: koren s. Nature. 2024 May;629(8010):136-145. doi: 10.1038/s41586-024-07278-3. Epub 2024 Apr 3. Nature. 2024. PMID: 38570684 Free PMC article.
319 results