Ghazanfar S - Search Results

1

Systematic functional identification of cancer multi-drug resistance genes.

Lau MT, Ghazanfar S, Parkin A, Chou A, Rouaen JR, Littleboy JB, Nessem D, Khuong TM, Nevoltris D, Schofield P, Langley D, Christ D, Yang J, Pajic M, Neely GG. Lau MT, et al. Among authors: ghazanfar s. Genome Biol. 2020 Feb 7;21(1):27. doi: 10.1186/s13059-020-1940-8. Genome Biol. 2020. PMID: 32028983 Free PMC article.

2

Characterizing mutation-expression network relationships in multiple cancers.

Ghazanfar S, Yang JYH. Ghazanfar S, et al. Comput Biol Chem. 2016 Aug;63:73-82. doi: 10.1016/j.compbiolchem.2016.02.009. Epub 2016 Feb 12. Comput Biol Chem. 2016. PMID: 26935398

3

Integrated single cell data analysis reveals cell specific networks and novel coactivation markers.

Ghazanfar S, Bisogni AJ, Ormerod JT, Lin DM, Yang JY. Ghazanfar S, et al. BMC Syst Biol. 2016 Dec 5;10(Suppl 5):127. doi: 10.1186/s12918-016-0370-4. BMC Syst Biol. 2016. PMID: 28105940 Free PMC article.

4

A 14-Protein Signature for Rapid Identification of Poor Prognosis Stage III Metastatic Melanoma.

Sykes EK, McDonald CE, Ghazanfar S, Mactier S, Thompson JF, Scolyer RA, Yang JY, Mann GJ, Christopherson RI. Sykes EK, et al. Among authors: ghazanfar s. Proteomics Clin Appl. 2018 May;12(3):e1700094. doi: 10.1002/prca.201700094. Epub 2018 Jan 19. Proteomics Clin Appl. 2018. PMID: 29227041

5

DCARS: differential correlation across ranked samples.

Ghazanfar S, Strbenac D, Ormerod JT, Yang JYH, Patrick E. Ghazanfar S, et al. Bioinformatics. 2019 Mar 1;35(5):823-829. doi: 10.1093/bioinformatics/bty698. Bioinformatics. 2019. PMID: 30102408

6

Tuning of delta-protocadherin adhesion through combinatorial diversity.

Bisogni AJ, Ghazanfar S, Williams EO, Marsh HM, Yang JY, Lin DM. Bisogni AJ, et al. Among authors: ghazanfar s. Elife. 2018 Dec 14;7:e41050. doi: 10.7554/eLife.41050. Elife. 2018. PMID: 30547884 Free PMC article.

7

Genome-wide analysis in Drosophila reveals diet-by-gene interactions and uncovers diet-responsive genes.

Francis D, Ghazanfar S, Havula E, Krycer JR, Strbenac D, Senior A, Minard AY, Geddes T, Nelson ME, Weiss F, Stöckli J, Yang JYH, James DE. Francis D, et al. Among authors: ghazanfar s. G3 (Bethesda). 2021 Sep 27;11(10):jkab171. doi: 10.1093/g3journal/jkab171. G3 (Bethesda). 2021. PMID: 34568906 Free PMC article.

8

Genetic variation of macronutrient tolerance in Drosophila melanogaster.

Havula E, Ghazanfar S, Lamichane N, Francis D, Hasygar K, Liu Y, Alton LA, Johnstone J, Needham EJ, Pulpitel T, Clark T, Niranjan HN, Shang V, Tong V, Jiwnani N, Audia G, Alves AN, Sylow L, Mirth C, Neely GG, Yang J, Hietakangas V, Simpson SJ, Senior AM. Havula E, et al. Among authors: ghazanfar s. Nat Commun. 2022 Mar 28;13(1):1637. doi: 10.1038/s41467-022-29183-x. Nat Commun. 2022. PMID: 35347148 Free PMC article.

9

Benchmarking of analytical combinations for COVID-19 outcome prediction using single-cell RNA sequencing data.

Cao Y, Ghazanfar S, Yang P, Yang J. Cao Y, et al. Among authors: ghazanfar s. Brief Bioinform. 2023 May 19;24(3):bbad159. doi: 10.1093/bib/bbad159. Brief Bioinform. 2023. PMID: 37096588 Free PMC article.

10

KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis.

Yang P, Patrick E, Humphrey SJ, Ghazanfar S, James DE, Jothi R, Yang JY. Yang P, et al. Among authors: ghazanfar s. Proteomics. 2016 Jul;16(13):1868-71. doi: 10.1002/pmic.201600068. Epub 2016 May 27. Proteomics. 2016. PMID: 27145998 Free PMC article.

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