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A draft genome sequence of the elusive giant squid, Architeuthis dux.
da Fonseca RR, Couto A, Machado AM, Brejova B, Albertin CB, Silva F, Gardner P, Baril T, Hayward A, Campos A, Ribeiro ÂM, Barrio-Hernandez I, Hoving HJ, Tafur-Jimenez R, Chu C, Frazão B, Petersen B, Peñaloza F, Musacchia F, Alexander GC, Osório H, Winkelmann I, Simakov O, Rasmussen S, Rahman MZ, Pisani D, Vinther J, Jarvis E, Zhang G, Strugnell JM, Castro LFC, Fedrigo O, Patricio M, Li Q, Rocha S, Antunes A, Wu Y, Ma B, Sanges R, Vinar T, Blagoev B, Sicheritz-Ponten T, Nielsen R, Gilbert MTP. da Fonseca RR, et al. Among authors: brejova b. Gigascience. 2020 Jan 1;9(1):giz152. doi: 10.1093/gigascience/giz152. Gigascience. 2020. PMID: 31942620 Free PMC article.
Optimal spaced seeds for homologous coding regions.
Brejová B, Brown DG, Vinar T. Brejová B, et al. J Bioinform Comput Biol. 2004 Jan;1(4):595-610. doi: 10.1142/s0219720004000326. J Bioinform Comput Biol. 2004. PMID: 15290755
Homology search for genes.
Cui X, Vinar T, Brejová B, Shasha D, Li M. Cui X, et al. Among authors: brejova b. Bioinformatics. 2007 Jul 1;23(13):i97-103. doi: 10.1093/bioinformatics/btm225. Bioinformatics. 2007. PMID: 17646351
Evolution of linear chromosomes and multipartite genomes in yeast mitochondria.
Valach M, Farkas Z, Fricova D, Kovac J, Brejova B, Vinar T, Pfeiffer I, Kucsera J, Tomaska L, Lang BF, Nosek J. Valach M, et al. Among authors: brejova b. Nucleic Acids Res. 2011 May;39(10):4202-19. doi: 10.1093/nar/gkq1345. Epub 2011 Jan 25. Nucleic Acids Res. 2011. PMID: 21266473 Free PMC article.
Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution.
Zhu S, Cao YZ, Jiang C, Tan BY, Wang Z, Feng S, Zhang L, Su XH, Brejova B, Vinar T, Xu M, Wang MX, Zhang SG, Huang MR, Wu R, Zhou Y. Zhu S, et al. Among authors: brejova b. BMC Genomics. 2012 Aug 9;13:382. doi: 10.1186/1471-2164-13-382. BMC Genomics. 2012. PMID: 22876864 Free PMC article.
The genome of the hydatid tapeworm Echinococcus granulosus.
Zheng H, Zhang W, Zhang L, Zhang Z, Li J, Lu G, Zhu Y, Wang Y, Huang Y, Liu J, Kang H, Chen J, Wang L, Chen A, Yu S, Gao Z, Jin L, Gu W, Wang Z, Zhao L, Shi B, Wen H, Lin R, Jones MK, Brejova B, Vinar T, Zhao G, McManus DP, Chen Z, Zhou Y, Wang S. Zheng H, et al. Among authors: brejova b. Nat Genet. 2013 Oct;45(10):1168-75. doi: 10.1038/ng.2757. Epub 2013 Sep 8. Nat Genet. 2013. PMID: 24013640
49 results