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Limited One-time Sampling Irregularity Map (LOTS-IM) for Automatic Unsupervised Assessment of White Matter Hyperintensities and Multiple Sclerosis Lesions in Structural Brain Magnetic Resonance Images.
Rachmadi MF, Valdés-Hernández MDC, Li H, Guerrero R, Meijboom R, Wiseman S, Waldman A, Zhang J, Rueckert D, Wardlaw J, Komura T. Rachmadi MF, et al. Comput Med Imaging Graph. 2020 Jan;79:101685. doi: 10.1016/j.compmedimag.2019.101685. Epub 2019 Nov 27. Comput Med Imaging Graph. 2020. PMID: 31846826
Segmentation of white matter hyperintensities using convolutional neural networks with global spatial information in routine clinical brain MRI with none or mild vascular pathology.
Rachmadi MF, Valdés-Hernández MDC, Agan MLF, Di Perri C, Komura T; Alzheimer's Disease Neuroimaging Initiative. Rachmadi MF, et al. Comput Med Imaging Graph. 2018 Jun;66:28-43. doi: 10.1016/j.compmedimag.2018.02.002. Epub 2018 Feb 17. Comput Med Imaging Graph. 2018. PMID: 29523002
The Brain/MINDS Marmoset Connectivity Resource: An open-access platform for cellular-level tracing and tractography in the primate brain.
Skibbe H, Rachmadi MF, Nakae K, Gutierrez CE, Hata J, Tsukada H, Poon C, Schlachter M, Doya K, Majka P, Rosa MGP, Okano H, Yamamori T, Ishii S, Reisert M, Watakabe A. Skibbe H, et al. Among authors: rachmadi mf. PLoS Biol. 2023 Jun 29;21(6):e3002158. doi: 10.1371/journal.pbio.3002158. eCollection 2023 Jun. PLoS Biol. 2023. PMID: 37384809 Free PMC article.
Local and long-distance organization of prefrontal cortex circuits in the marmoset brain.
Watakabe A, Skibbe H, Nakae K, Abe H, Ichinohe N, Rachmadi MF, Wang J, Takaji M, Mizukami H, Woodward A, Gong R, Hata J, Van Essen DC, Okano H, Ishii S, Yamamori T. Watakabe A, et al. Among authors: rachmadi mf. Neuron. 2023 Jul 19;111(14):2258-2273.e10. doi: 10.1016/j.neuron.2023.04.028. Epub 2023 May 16. Neuron. 2023. PMID: 37196659 Free PMC article.