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MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities.
Cao L, Gurevich A, Alexander KL, Naman CB, Leão T, Glukhov E, Luzzatto-Knaan T, Vargas F, Quinn R, Bouslimani A, Nothias LF, Singh NK, Sanders JG, Benitez RAS, Thompson LR, Hamid MN, Morton JT, Mikheenko A, Shlemov A, Korobeynikov A, Friedberg I, Knight R, Venkateswaran K, Gerwick WH, Gerwick L, Dorrestein PC, Pevzner PA, Mohimani H. Cao L, et al. Among authors: pevzner pa. Cell Syst. 2019 Dec 18;9(6):600-608.e4. doi: 10.1016/j.cels.2019.09.004. Epub 2019 Oct 16. Cell Syst. 2019. PMID: 31629686 Free PMC article.
Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides.
Liu WT, Ng J, Meluzzi D, Bandeira N, Gutierrez M, Simmons TL, Schultz AW, Linington RG, Moore BS, Gerwick WH, Pevzner PA, Dorrestein PC. Liu WT, et al. Among authors: pevzner pa. Anal Chem. 2009 Jun 1;81(11):4200-9. doi: 10.1021/ac900114t. Anal Chem. 2009. PMID: 19413302 Free PMC article.
Dereplication and de novo sequencing of nonribosomal peptides.
Ng J, Bandeira N, Liu WT, Ghassemian M, Simmons TL, Gerwick WH, Linington R, Dorrestein PC, Pevzner PA. Ng J, et al. Among authors: pevzner pa. Nat Methods. 2009 Aug;6(8):596-9. doi: 10.1038/nmeth.1350. Epub 2009 Jul 13. Nat Methods. 2009. PMID: 19597502 Free PMC article.
Synergistic allelochemicals from a freshwater cyanobacterium.
Leão PN, Pereira AR, Liu WT, Ng J, Pevzner PA, Dorrestein PC, König GM, Vasconcelos VM, Gerwick WH. Leão PN, et al. Among authors: pevzner pa. Proc Natl Acad Sci U S A. 2010 Jun 22;107(25):11183-8. doi: 10.1073/pnas.0914343107. Epub 2010 Jun 7. Proc Natl Acad Sci U S A. 2010. PMID: 20534563 Free PMC article.
Imaging mass spectrometry of intraspecies metabolic exchange revealed the cannibalistic factors of Bacillus subtilis.
Liu WT, Yang YL, Xu Y, Lamsa A, Haste NM, Yang JY, Ng J, Gonzalez D, Ellermeier CD, Straight PD, Pevzner PA, Pogliano J, Nizet V, Pogliano K, Dorrestein PC. Liu WT, et al. Among authors: pevzner pa. Proc Natl Acad Sci U S A. 2010 Sep 14;107(37):16286-90. doi: 10.1073/pnas.1008368107. Epub 2010 Aug 30. Proc Natl Acad Sci U S A. 2010. PMID: 20805502 Free PMC article.
Sequencing cyclic peptides by multistage mass spectrometry.
Mohimani H, Yang YL, Liu WT, Hsieh PW, Dorrestein PC, Pevzner PA. Mohimani H, et al. Among authors: pevzner pa. Proteomics. 2011 Sep;11(18):3642-50. doi: 10.1002/pmic.201000697. Epub 2011 Aug 9. Proteomics. 2011. PMID: 21751357 Free PMC article.
227 results