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Comparative visualization of protein secondary structures.
Kocincová L, Jarešová M, Byška J, Parulek J, Hauser H, Kozlíková B. Kocincová L, et al. Among authors: kozlikova b. BMC Bioinformatics. 2017 Feb 15;18(Suppl 2):23. doi: 10.1186/s12859-016-1449-z. BMC Bioinformatics. 2017. PMID: 28251875 Free PMC article.
Interactive exploration of ligand transportation through protein tunnels.
Furmanová K, Jarešová M, Byška J, Jurčík A, Parulek J, Hauser H, Kozlíková B. Furmanová K, et al. Among authors: kozlikova b. BMC Bioinformatics. 2017 Feb 15;18(Suppl 2):22. doi: 10.1186/s12859-016-1448-0. BMC Bioinformatics. 2017. PMID: 28251878 Free PMC article.
Computational Analysis of Protein Tunnels and Channels.
Brezovsky J, Kozlikova B, Damborsky J. Brezovsky J, et al. Among authors: kozlikova b. Methods Mol Biol. 2018;1685:25-42. doi: 10.1007/978-1-4939-7366-8_3. Methods Mol Biol. 2018. PMID: 29086302
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories.
Jurcik A, Bednar D, Byska J, Marques SM, Furmanova K, Daniel L, Kokkonen P, Brezovsky J, Strnad O, Stourac J, Pavelka A, Manak M, Damborsky J, Kozlikova B. Jurcik A, et al. Among authors: kozlikova b. Bioinformatics. 2018 Oct 15;34(20):3586-3588. doi: 10.1093/bioinformatics/bty386. Bioinformatics. 2018. PMID: 29741570 Free PMC article.
24 results