Hung LH - Search Results

1

Building Containerized Workflows Using the BioDepot-Workflow-Builder.

Hung LH, Hu J, Meiss T, Ingersoll A, Lloyd W, Kristiyanto D, Xiong Y, Sobie E, Yeung KY. Hung LH, et al. Cell Syst. 2019 Nov 27;9(5):508-514.e3. doi: 10.1016/j.cels.2019.08.007. Epub 2019 Sep 11. Cell Syst. 2019. PMID: 31521606 Free PMC article.

2

GUIdock: Using Docker Containers with a Common Graphics User Interface to Address the Reproducibility of Research.

Hung LH, Kristiyanto D, Lee SB, Yeung KY. Hung LH, et al. PLoS One. 2016 Apr 5;11(4):e0152686. doi: 10.1371/journal.pone.0152686. eCollection 2016. PLoS One. 2016. PMID: 27045593 Free PMC article.

3

GUIdock-VNC: using a graphical desktop sharing system to provide a browser-based interface for containerized software.

Mittal V, Hung LH, Keswani J, Kristiyanto D, Lee SB, Yeung KY. Mittal V, et al. Among authors: hung lh. Gigascience. 2017 Apr 1;6(4):1-6. doi: 10.1093/gigascience/giw013. Gigascience. 2017. PMID: 28327936 Free PMC article.

4

fastBMA: scalable network inference and transitive reduction.

Hung LH, Shi K, Wu M, Young WC, Raftery AE, Yeung KY. Hung LH, et al. Gigascience. 2017 Oct 1;6(10):1-10. doi: 10.1093/gigascience/gix078. Gigascience. 2017. PMID: 29020744 Free PMC article.

5

Reproducible Bioconductor workflows using browser-based interactive notebooks and containers.

Almugbel R, Hung LH, Hu J, Almutairy A, Ortogero N, Tamta Y, Yeung KY. Almugbel R, et al. Among authors: hung lh. J Am Med Inform Assoc. 2018 Jan 1;25(1):4-12. doi: 10.1093/jamia/ocx120. J Am Med Inform Assoc. 2018. PMID: 29092073 Free PMC article.

6

Hot-starting software containers for STAR aligner.

Zhang P, Hung LH, Lloyd W, Yeung KY. Zhang P, et al. Among authors: hung lh. Gigascience. 2018 Aug 1;7(8):giy092. doi: 10.1093/gigascience/giy092. Gigascience. 2018. PMID: 30085034 Free PMC article.

7

Holistic optimization of an RNA-seq workflow for multi-threaded environments.

Hung LH, Lloyd W, Agumbe Sridhar R, Athmalingam Ravishankar SD, Xiong Y, Sobie E, Yeung KY. Hung LH, et al. Bioinformatics. 2019 Oct 15;35(20):4173-4175. doi: 10.1093/bioinformatics/btz169. Bioinformatics. 2019. PMID: 30859176 Free PMC article.

8

Integration of Multiple Data Sources for Gene Network Inference Using Genetic Perturbation Data.

Liang X, Young WC, Hung LH, Raftery AE, Yeung KY. Liang X, et al. Among authors: hung lh. J Comput Biol. 2019 Oct;26(10):1113-1129. doi: 10.1089/cmb.2019.0036. Epub 2019 Apr 22. J Comput Biol. 2019. PMID: 31009236 Free PMC article.

9

A graphical, interactive and GPU-enabled workflow to process long-read sequencing data.

Reddy S, Hung LH, Sala-Torra O, Radich JP, Yeung CC, Yeung KY. Reddy S, et al. Among authors: hung lh. BMC Genomics. 2021 Aug 23;22(1):626. doi: 10.1186/s12864-021-07927-1. BMC Genomics. 2021. PMID: 34425749 Free PMC article.

10

Cloud-enabled Biodepot workflow builder integrates image processing using Fiji with reproducible data analysis using Jupyter notebooks.

Hung LH, Straw E, Reddy S, Schmitz R, Colburn Z, Yeung KY. Hung LH, et al. Sci Rep. 2022 Sep 2;12(1):14920. doi: 10.1038/s41598-022-19173-w. Sci Rep. 2022. PMID: 36056115 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

73 results

Search Page