Stefan C - Search Results

1

FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science.

Sichtig H, Minogue T, Yan Y, Stefan C, Hall A, Tallon L, Sadzewicz L, Nadendla S, Klimke W, Hatcher E, Shumway M, Aldea DL, Allen J, Koehler J, Slezak T, Lovell S, Schoepp R, Scherf U. Sichtig H, et al. Among authors: stefan c. Nat Commun. 2019 Jul 25;10(1):3313. doi: 10.1038/s41467-019-11306-6. Nat Commun. 2019. PMID: 31346170 Free PMC article.

2

Development of real-time reverse transcriptase qPCR assays for the detection of Punta Toro virus and Pichinde virus.

Stefan CP, Chase K, Coyne S, Kulesh DA, Minogue TD, Koehler JW. Stefan CP, et al. Virol J. 2016 Mar 31;13:54. doi: 10.1186/s12985-016-0509-3. Virol J. 2016. PMID: 27029488 Free PMC article.

3

Targeted next-generation sequencing for the detection of ciprofloxacin resistance markers using molecular inversion probes.

Stefan CP, Koehler JW, Minogue TD. Stefan CP, et al. Sci Rep. 2016 May 13;6:25904. doi: 10.1038/srep25904. Sci Rep. 2016. PMID: 27174456 Free PMC article.

4

Detection of 16S rRNA and KPC Genes from Complex Matrix Utilizing a Molecular Inversion Probe Assay for Next-Generation Sequencing.

Stefan CP, Hall AT, Minogue TD. Stefan CP, et al. Sci Rep. 2018 Feb 1;8(1):2028. doi: 10.1038/s41598-018-19501-z. Sci Rep. 2018. PMID: 29391471 Free PMC article.

5

Diagnostic targETEd seQuencing adjudicaTion (DETEQT): Algorithms for Adjudicating Targeted Infectious Disease Next-Generation Sequencing Panels.

Conrad TA, Lo CC, Koehler JW, Graham AS, Stefan CP, Hall AT, Douglas CE, Chain PS, Minogue TD. Conrad TA, et al. J Mol Diagn. 2019 Jan;21(1):99-110. doi: 10.1016/j.jmoldx.2018.08.008. Epub 2018 Sep 28. J Mol Diagn. 2019. PMID: 30268944 Free article.

6

Next-Generation Sequencing for Biodefense: Biothreat Detection, Forensics, and the Clinic.

Minogue TD, Koehler JW, Stefan CP, Conrad TA. Minogue TD, et al. Clin Chem. 2019 Mar;65(3):383-392. doi: 10.1373/clinchem.2016.266536. Epub 2018 Oct 23. Clin Chem. 2019. PMID: 30352865 Review.

7

Rapid antibiotic susceptibility testing from blood culture bottles with species agnostic real-time polymerase chain reaction.

Maxson T, Blancett CD, Graham AS, Stefan CP, Minogue TD. Maxson T, et al. PLoS One. 2018 Dec 13;13(12):e0209042. doi: 10.1371/journal.pone.0209042. eCollection 2018. PLoS One. 2018. PMID: 30543695 Free PMC article.

8

Comparison of Illumina and Oxford Nanopore Sequencing Technologies for Pathogen Detection from Clinical Matrices Using Molecular Inversion Probes.

Stefan CP, Hall AT, Graham AS, Minogue TD. Stefan CP, et al. J Mol Diagn. 2022 Apr;24(4):395-405. doi: 10.1016/j.jmoldx.2021.12.005. Epub 2022 Jan 25. J Mol Diagn. 2022. PMID: 35085783 Free article.

9

Exposure Route Influences Disease Severity in the COVID-19 Cynomolgus Macaque Model.

Bixler SL, Stefan CP, Jay AN, Rossi FD, Ricks KM, Shoemaker CJ, Moreau AM, Zeng X, Hooper JW, Dyer DN, Frick OM, Koehler JW, Kearney BJ, DiPinto N, Liu J, Tostenson SD, Clements TL, Smith JM, Johnson JA, Berrier KL, Esham HL, Delp KL, Coyne SR, Bloomfield HA, Kuehnert PA, Akers K, Gibson KM, Minogue TD, Nalca A, Pitt MLM. Bixler SL, et al. Viruses. 2022 May 10;14(5):1013. doi: 10.3390/v14051013. Viruses. 2022. PMID: 35632755 Free PMC article.

10

Sequence optimized diagnostic assay for Ebola virus detection.

Koehler JW, Stefan CP, Hall AT, Delp KL, O'Hearn AE, Taylor-Howell CL, Wauquier N, Schoepp RJ, Minogue TD. Koehler JW, et al. Among authors: stefan cp. Sci Rep. 2023 Nov 1;13(1):18840. doi: 10.1038/s41598-023-29390-6. Sci Rep. 2023. PMID: 37914767 Free PMC article.

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