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The butterfly plant arms-race escalated by gene and genome duplications.
Edger PP, Heidel-Fischer HM, Bekaert M, Rota J, Glöckner G, Platts AE, Heckel DG, Der JP, Wafula EK, Tang M, Hofberger JA, Smithson A, Hall JC, Blanchette M, Bureau TE, Wright SI, dePamphilis CW, Eric Schranz M, Barker MS, Conant GC, Wahlberg N, Vogel H, Pires JC, Wheat CW. Edger PP, et al. Among authors: barker ms. Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8362-6. doi: 10.1073/pnas.1503926112. Epub 2015 Jun 22. Proc Natl Acad Sci U S A. 2015. PMID: 26100883 Free PMC article.
Phylogeny and multiple independent whole-genome duplication events in the Brassicales.
Mabry ME, Brose JM, Blischak PD, Sutherland B, Dismukes WT, Bottoms CA, Edger PP, Washburn JD, An H, Hall JC, McKain MR, Al-Shehbaz I, Barker MS, Schranz ME, Conant GC, Pires JC. Mabry ME, et al. Among authors: barker ms. Am J Bot. 2020 Aug;107(8):1148-1164. doi: 10.1002/ajb2.1514. Epub 2020 Aug 24. Am J Bot. 2020. PMID: 32830865 Free PMC article.
The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible.
Hao Y, Mabry ME, Edger PP, Freeling M, Zheng C, Jin L, VanBuren R, Colle M, An H, Abrahams RS, Washburn JD, Qi X, Barry K, Daum C, Shu S, Schmutz J, Sankoff D, Barker MS, Lyons E, Pires JC, Conant GC. Hao Y, et al. Among authors: barker ms. Genome Res. 2021 May;31(5):799-810. doi: 10.1101/gr.270033.120. Epub 2021 Apr 16. Genome Res. 2021. PMID: 33863805 Free PMC article.
Analysis of the Coptis chinensis genome reveals the diversification of protoberberine-type alkaloids.
Liu Y, Wang B, Shu S, Li Z, Song C, Liu D, Niu Y, Liu J, Zhang J, Liu H, Hu Z, Huang B, Liu X, Liu W, Jiang L, Alami MM, Zhou Y, Ma Y, He X, Yang Y, Zhang T, Hu H, Barker MS, Chen S, Wang X, Nie J. Liu Y, et al. Among authors: barker ms. Nat Commun. 2021 Jun 2;12(1):3276. doi: 10.1038/s41467-021-23611-0. Nat Commun. 2021. PMID: 34078898 Free PMC article.
Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids.
Bayer PE, Scheben A, Golicz AA, Yuan Y, Faure S, Lee H, Chawla HS, Anderson R, Bancroft I, Raman H, Lim YP, Robbens S, Jiang L, Liu S, Barker MS, Schranz ME, Wang X, King GJ, Pires JC, Chalhoub B, Snowdon RJ, Batley J, Edwards D. Bayer PE, et al. Among authors: barker ms. Plant Biotechnol J. 2021 Dec;19(12):2488-2500. doi: 10.1111/pbi.13674. Epub 2021 Aug 24. Plant Biotechnol J. 2021. PMID: 34310022 Free PMC article.
104 results