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Evaluating riboswitch optimality.
Wayment-Steele H, Wu M, Gotrik M, Das R. Wayment-Steele H, et al. Among authors: wu m. Methods Enzymol. 2019;623:417-450. doi: 10.1016/bs.mie.2019.05.028. Epub 2019 Jun 18. Methods Enzymol. 2019. PMID: 31239056 Free PMC article.
Principles for Predicting RNA Secondary Structure Design Difficulty.
Anderson-Lee J, Fisker E, Kosaraju V, Wu M, Kong J, Lee J, Lee M, Zada M, Treuille A, Das R; Eterna Players. Anderson-Lee J, et al. Among authors: wu m. J Mol Biol. 2016 Feb 27;428(5 Pt A):748-757. doi: 10.1016/j.jmb.2015.11.013. Epub 2016 Feb 17. J Mol Biol. 2016. PMID: 26902426 Free PMC article.
Automated Design of Diverse Stand-Alone Riboswitches.
Wu MJ, Andreasson JOL, Kladwang W, Greenleaf W, Das R. Wu MJ, et al. ACS Synth Biol. 2019 Aug 16;8(8):1838-1846. doi: 10.1021/acssynbio.9b00142. Epub 2019 Jul 29. ACS Synth Biol. 2019. PMID: 31298841 Free PMC article.
Compact RNA sensors for increasingly complex functions of multiple inputs.
Choe C, Andreasson JOL, Melaine F, Kladwang W, Wu MJ, Portela F, Wellington-Oguri R, Nicol JJ, Wayment-Steele HK, Gotrik M, Participants E, Khatri P, Greenleaf WJ, Das R. Choe C, et al. Among authors: wu mj. bioRxiv [Preprint]. 2024 Jan 16:2024.01.04.572289. doi: 10.1101/2024.01.04.572289. bioRxiv. 2024. PMID: 38260323 Free PMC article. Preprint.
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