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Evaluating riboswitch optimality.
Wayment-Steele H, Wu M, Gotrik M, Das R. Wayment-Steele H, et al. Among authors: gotrik m. Methods Enzymol. 2019;623:417-450. doi: 10.1016/bs.mie.2019.05.028. Epub 2019 Jun 18. Methods Enzymol. 2019. PMID: 31239056 Free PMC article.
Crowdsourced RNA design discovers diverse, reversible, efficient, self-contained molecular switches.
Andreasson JOL, Gotrik MR, Wu MJ, Wayment-Steele HK, Kladwang W, Portela F, Wellington-Oguri R; Eterna Participants; Das R, Greenleaf WJ. Andreasson JOL, et al. Among authors: gotrik mr. Proc Natl Acad Sci U S A. 2022 May 3;119(18):e2112979119. doi: 10.1073/pnas.2112979119. Epub 2022 Apr 26. Proc Natl Acad Sci U S A. 2022. PMID: 35471911 Free PMC article.
Computational design of three-dimensional RNA structure and function.
Yesselman JD, Eiler D, Carlson ED, Gotrik MR, d'Aquino AE, Ooms AN, Kladwang W, Carlson PD, Shi X, Costantino DA, Herschlag D, Lucks JB, Jewett MC, Kieft JS, Das R. Yesselman JD, et al. Among authors: gotrik mr. Nat Nanotechnol. 2019 Sep;14(9):866-873. doi: 10.1038/s41565-019-0517-8. Epub 2019 Aug 19. Nat Nanotechnol. 2019. PMID: 31427748 Free PMC article.
Advancements in Aptamer Discovery Technologies.
Gotrik MR, Feagin TA, Csordas AT, Nakamoto MA, Soh HT. Gotrik MR, et al. Acc Chem Res. 2016 Sep 20;49(9):1903-10. doi: 10.1021/acs.accounts.6b00283. Epub 2016 Aug 15. Acc Chem Res. 2016. PMID: 27526193
Direct Selection of Fluorescence-Enhancing RNA Aptamers.
Gotrik M, Sekhon G, Saurabh S, Nakamoto M, Eisenstein M, Soh HT. Gotrik M, et al. J Am Chem Soc. 2018 Mar 14;140(10):3583-3591. doi: 10.1021/jacs.7b10724. Epub 2018 Mar 5. J Am Chem Soc. 2018. PMID: 29505267
Compact RNA sensors for increasingly complex functions of multiple inputs.
Choe C, Andreasson JOL, Melaine F, Kladwang W, Wu MJ, Portela F, Wellington-Oguri R, Nicol JJ, Wayment-Steele HK, Gotrik M, Participants E, Khatri P, Greenleaf WJ, Das R. Choe C, et al. Among authors: gotrik m. bioRxiv [Preprint]. 2024 Jan 16:2024.01.04.572289. doi: 10.1101/2024.01.04.572289. bioRxiv. 2024. PMID: 38260323 Free PMC article. Preprint.