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ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.
Puntervoll P, Linding R, Gemünd C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DM, Ausiello G, Brannetti B, Costantini A, Ferrè F, Maselli V, Via A, Cesareni G, Diella F, Superti-Furga G, Wyrwicz L, Ramu C, McGuigan C, Gudavalli R, Letunic I, Bork P, Rychlewski L, Küster B, Helmer-Citterich M, Hunter WN, Aasland R, Gibson TJ. Puntervoll P, et al. Among authors: ferre f. Nucleic Acids Res. 2003 Jul 1;31(13):3625-30. doi: 10.1093/nar/gkg545. Nucleic Acids Res. 2003. PMID: 12824381 Free PMC article.
A novel approach to represent and compare RNA secondary structures.
Mattei E, Ausiello G, Ferrè F, Helmer-Citterich M. Mattei E, et al. Among authors: ferre f. Nucleic Acids Res. 2014 Jun;42(10):6146-57. doi: 10.1093/nar/gku283. Epub 2014 Apr 21. Nucleic Acids Res. 2014. PMID: 24753415 Free PMC article.
BEAM web server: a tool for structural RNA motif discovery.
Pietrosanto M, Adinolfi M, Casula R, Ausiello G, Ferrè F, Helmer-Citterich M. Pietrosanto M, et al. Among authors: ferre f. Bioinformatics. 2018 Mar 15;34(6):1058-1060. doi: 10.1093/bioinformatics/btx704. Bioinformatics. 2018. PMID: 29095974 Free PMC article.
356 results