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simuG: a general-purpose genome simulator.
Yue JX, Liti G. Yue JX, et al. Bioinformatics. 2019 Nov 1;35(21):4442-4444. doi: 10.1093/bioinformatics/btz424. Bioinformatics. 2019. PMID: 31116378 Free PMC article.
Ploidy influences the functional attributes of de novo lager yeast hybrids.
Krogerus K, Arvas M, De Chiara M, Magalhães F, Mattinen L, Oja M, Vidgren V, Yue JX, Liti G, Gibson B. Krogerus K, et al. Among authors: yue jx. Appl Microbiol Biotechnol. 2016 Aug;100(16):7203-22. doi: 10.1007/s00253-016-7588-3. Epub 2016 May 17. Appl Microbiol Biotechnol. 2016. PMID: 27183995 Free PMC article.
Contrasting evolutionary genome dynamics between domesticated and wild yeasts.
Yue JX, Li J, Aigrain L, Hallin J, Persson K, Oliver K, Bergström A, Coupland P, Warringer J, Lagomarsino MC, Fischer G, Durbin R, Liti G. Yue JX, et al. Nat Genet. 2017 Jun;49(6):913-924. doi: 10.1038/ng.3847. Epub 2017 Apr 17. Nat Genet. 2017. PMID: 28416820 Free PMC article.
De novo yeast genome assemblies from MinION, PacBio and MiSeq platforms.
Giordano F, Aigrain L, Quail MA, Coupland P, Bonfield JK, Davies RM, Tischler G, Jackson DK, Keane TM, Li J, Yue JX, Liti G, Durbin R, Ning Z. Giordano F, et al. Among authors: yue jx. Sci Rep. 2017 Jun 21;7(1):3935. doi: 10.1038/s41598-017-03996-z. Sci Rep. 2017. PMID: 28638050 Free PMC article.
Genome evolution across 1,011 Saccharomyces cerevisiae isolates.
Peter J, De Chiara M, Friedrich A, Yue JX, Pflieger D, Bergström A, Sigwalt A, Barre B, Freel K, Llored A, Cruaud C, Labadie K, Aury JM, Istace B, Lebrigand K, Barbry P, Engelen S, Lemainque A, Wincker P, Liti G, Schacherer J. Peter J, et al. Among authors: yue jx. Nature. 2018 Apr;556(7701):339-344. doi: 10.1038/s41586-018-0030-5. Epub 2018 Apr 11. Nature. 2018. PMID: 29643504 Free PMC article.
Human RAP1 specifically protects telomeres of senescent cells from DNA damage.
Lototska L, Yue JX, Li J, Giraud-Panis MJ, Songyang Z, Royle NJ, Liti G, Ye J, Gilson E, Mendez-Bermudez A. Lototska L, et al. Among authors: yue jx. EMBO Rep. 2020 Apr 3;21(4):e49076. doi: 10.15252/embr.201949076. Epub 2020 Feb 25. EMBO Rep. 2020. PMID: 32096305 Free PMC article.
A yeast living ancestor reveals the origin of genomic introgressions.
D'Angiolo M, De Chiara M, Yue JX, Irizar A, Stenberg S, Persson K, Llored A, Barré B, Schacherer J, Marangoni R, Gilson E, Warringer J, Liti G. D'Angiolo M, et al. Among authors: yue jx. Nature. 2020 Nov;587(7834):420-425. doi: 10.1038/s41586-020-2889-1. Epub 2020 Nov 11. Nature. 2020. PMID: 33177709 Free article.
59 results