Kamvar ZN - Search Results

1

Outbreak analytics: a developing data science for informing the response to emerging pathogens.

Polonsky JA, Baidjoe A, Kamvar ZN, Cori A, Durski K, Edmunds WJ, Eggo RM, Funk S, Kaiser L, Keating P, de Waroux OLP, Marks M, Moraga P, Morgan O, Nouvellet P, Ratnayake R, Roberts CH, Whitworth J, Jombart T. Polonsky JA, et al. Among authors: kamvar zn. Philos Trans R Soc Lond B Biol Sci. 2019 Jul 8;374(1776):20180276. doi: 10.1098/rstb.2018.0276. Philos Trans R Soc Lond B Biol Sci. 2019. PMID: 31104603 Free PMC article. Review.

2

Improved inference of time-varying reproduction numbers during infectious disease outbreaks.

Thompson RN, Stockwin JE, van Gaalen RD, Polonsky JA, Kamvar ZN, Demarsh PA, Dahlqwist E, Li S, Miguel E, Jombart T, Lessler J, Cauchemez S, Cori A. Thompson RN, et al. Among authors: kamvar zn. Epidemics. 2019 Dec;29:100356. doi: 10.1016/j.epidem.2019.100356. Epub 2019 Aug 26. Epidemics. 2019. PMID: 31624039 Free PMC article.

3

epiflows: an R package for risk assessment of travel-related spread of disease.

Moraga P, Dorigatti I, Kamvar ZN, Piatkowski P, Toikkanen SE, Nagraj VP, Donnelly CA, Jombart T. Moraga P, et al. Among authors: kamvar zn. F1000Res. 2018 Aug 31;7:1374. doi: 10.12688/f1000research.16032.3. eCollection 2018. F1000Res. 2018. PMID: 31543947 Free PMC article.

4

Epidemic curves made easy using the R package incidence.

Kamvar ZN, Cai J, Pulliam JRC, Schumacher J, Jombart T. Kamvar ZN, et al. F1000Res. 2019 Jan 31;8:139. doi: 10.12688/f1000research.18002.1. eCollection 2019. F1000Res. 2019. PMID: 31119031 Free PMC article.

5

apex: phylogenetics with multiple genes.

Jombart T, Archer F, Schliep K, Kamvar Z, Harris R, Paradis E, Goudet J, Lapp H. Jombart T, et al. Mol Ecol Resour. 2017 Jan;17(1):19-26. doi: 10.1111/1755-0998.12567. Epub 2016 Aug 12. Mol Ecol Resour. 2017. PMID: 27417145 Free PMC article.

6

Developing educational resources for population genetics in R: an open and collaborative approach.

Kamvar ZN, López-Uribe MM, Coughlan S, Grünwald NJ, Lapp H, Manel S. Kamvar ZN, et al. Mol Ecol Resour. 2017 Jan;17(1):120-128. doi: 10.1111/1755-0998.12558. Epub 2016 Jul 12. Mol Ecol Resour. 2017. PMID: 27297607

7

Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality.

Kamvar ZN, Brooks JC, Grünwald NJ. Kamvar ZN, et al. Front Genet. 2015 Jun 10;6:208. doi: 10.3389/fgene.2015.00208. eCollection 2015. Front Genet. 2015. PMID: 26113860 Free PMC article.

8

Best Practices for Population Genetic Analyses.

Grünwald NJ, Everhart SE, Knaus BJ, Kamvar ZN. Grünwald NJ, et al. Among authors: kamvar zn. Phytopathology. 2017 Sep;107(9):1000-1010. doi: 10.1094/PHYTO-12-16-0425-RVW. Epub 2017 Jul 27. Phytopathology. 2017. PMID: 28513284 Free article.

9

Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction.

Kamvar ZN, Tabima JF, Grünwald NJ. Kamvar ZN, et al. PeerJ. 2014 Mar 4;2:e281. doi: 10.7717/peerj.281. eCollection 2014. PeerJ. 2014. PMID: 24688859 Free PMC article.

10

Microbe-ID: an open source toolbox for microbial genotyping and species identification.

Tabima JF, Everhart SE, Larsen MM, Weisberg AJ, Kamvar ZN, Tancos MA, Smart CD, Chang JH, Grünwald NJ. Tabima JF, et al. Among authors: kamvar zn. PeerJ. 2016 Aug 18;4:e2279. doi: 10.7717/peerj.2279. eCollection 2016. PeerJ. 2016. PMID: 27602267 Free PMC article.

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