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Respiratory Syncytial Virus whole-genome sequencing identifies convergent evolution of sequence duplication in the C-terminus of the G gene.
Schobel SA, Stucker KM, Moore ML, Anderson LJ, Larkin EK, Shankar J, Bera J, Puri V, Shilts MH, Rosas-Salazar C, Halpin RA, Fedorova N, Shrivastava S, Stockwell TB, Peebles RS, Hartert TV, Das SR. Schobel SA, et al. Among authors: stockwell tb. Sci Rep. 2016 May 23;6:26311. doi: 10.1038/srep26311. Sci Rep. 2016. PMID: 27212633 Free PMC article.
Deep Sequencing of Influenza A Virus from a Human Challenge Study Reveals a Selective Bottleneck and Only Limited Intrahost Genetic Diversification.
Sobel Leonard A, McClain MT, Smith GJ, Wentworth DE, Halpin RA, Lin X, Ransier A, Stockwell TB, Das SR, Gilbert AS, Lambkin-Williams R, Ginsburg GS, Woods CW, Koelle K. Sobel Leonard A, et al. Among authors: stockwell tb. J Virol. 2016 Nov 28;90(24):11247-11258. doi: 10.1128/JVI.01657-16. Print 2016 Dec 15. J Virol. 2016. PMID: 27707932 Free PMC article.
The effective rate of influenza reassortment is limited during human infection.
Sobel Leonard A, McClain MT, Smith GJ, Wentworth DE, Halpin RA, Lin X, Ransier A, Stockwell TB, Das SR, Gilbert AS, Lambkin-Williams R, Ginsburg GS, Woods CW, Koelle K, Illingworth CJ. Sobel Leonard A, et al. Among authors: stockwell tb. PLoS Pathog. 2017 Feb 7;13(2):e1006203. doi: 10.1371/journal.ppat.1006203. eCollection 2017 Feb. PLoS Pathog. 2017. PMID: 28170438 Free PMC article.
Large-Scale Complete-Genome Sequencing and Phylodynamic Analysis of Eastern Equine Encephalitis Virus Reveals Source-Sink Transmission Dynamics in the United States.
Tan Y, Lam TT, Heberlein-Larson LA, Smole SC, Auguste AJ, Hennigan S, Halpin RA, Fedorova N, Puri V, Stockwell TB, Shilts MH, Andreadis T, Armstrong PM, Tesh RB, Weaver SC, Unnasch TR, Ciota AT, Kramer LD, Das SR. Tan Y, et al. Among authors: stockwell tb. J Virol. 2018 May 29;92(12):e00074-18. doi: 10.1128/JVI.00074-18. Print 2018 Jun 15. J Virol. 2018. PMID: 29618651 Free PMC article.
Characterization of uncultivable bat influenza virus using a replicative synthetic virus.
Zhou B, Ma J, Liu Q, Bawa B, Wang W, Shabman RS, Duff M, Lee J, Lang Y, Cao N, Nagy A, Lin X, Stockwell TB, Richt JA, Wentworth DE, Ma W. Zhou B, et al. Among authors: stockwell tb. PLoS Pathog. 2014 Oct 2;10(10):e1004420. doi: 10.1371/journal.ppat.1004420. eCollection 2014 Oct. PLoS Pathog. 2014. PMID: 25275541 Free PMC article.
The soft palate is an important site of adaptation for transmissible influenza viruses.
Lakdawala SS, Jayaraman A, Halpin RA, Lamirande EW, Shih AR, Stockwell TB, Lin X, Simenauer A, Hanson CT, Vogel L, Paskel M, Minai M, Moore I, Orandle M, Das SR, Wentworth DE, Sasisekharan R, Subbarao K. Lakdawala SS, et al. Among authors: stockwell tb. Nature. 2015 Oct 1;526(7571):122-5. doi: 10.1038/nature15379. Epub 2015 Sep 23. Nature. 2015. PMID: 26416728 Free PMC article.
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