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BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: mueller la. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
Querying and computing with BioCyc databases.
Krummenacker M, Paley S, Mueller L, Yan T, Karp PD. Krummenacker M, et al. Bioinformatics. 2005 Aug 15;21(16):3454-5. doi: 10.1093/bioinformatics/bti546. Epub 2005 Jun 16. Bioinformatics. 2005. PMID: 15961440 Free PMC article.
The SGN comparative map viewer.
Mueller LA, Mills AA, Skwarecki B, Buels RM, Menda N, Tanksley SD. Mueller LA, et al. Bioinformatics. 2008 Feb 1;24(3):422-3. doi: 10.1093/bioinformatics/btm597. Epub 2008 Jan 17. Bioinformatics. 2008. PMID: 18202028
Linking the potato genome to the conserved ortholog set (COS) markers.
Lindqvist-Kreuze H, Cho K, Portal L, Rodríguez F, Simon R, Mueller LA, Spooner DM, Bonierbale M. Lindqvist-Kreuze H, et al. Among authors: mueller la. BMC Genet. 2013 Jun 8;14:51. doi: 10.1186/1471-2156-14-51. BMC Genet. 2013. PMID: 23758607 Free PMC article.
The Sol Genomics Network (SGN)--from genotype to phenotype to breeding.
Fernandez-Pozo N, Menda N, Edwards JD, Saha S, Tecle IY, Strickler SR, Bombarely A, Fisher-York T, Pujar A, Foerster H, Yan A, Mueller LA. Fernandez-Pozo N, et al. Among authors: mueller la. Nucleic Acids Res. 2015 Jan;43(Database issue):D1036-41. doi: 10.1093/nar/gku1195. Epub 2014 Nov 26. Nucleic Acids Res. 2015. PMID: 25428362 Free PMC article.
solGS: a web-based tool for genomic selection.
Tecle IY, Edwards JD, Menda N, Egesi C, Rabbi IY, Kulakow P, Kawuki R, Jannink JL, Mueller LA. Tecle IY, et al. Among authors: mueller la. BMC Bioinformatics. 2014 Dec 14;15(1):398. doi: 10.1186/s12859-014-0398-7. BMC Bioinformatics. 2014. PMID: 25495537 Free PMC article.
The Tomato Expression Atlas.
Fernandez-Pozo N, Zheng Y, Snyder SI, Nicolas P, Shinozaki Y, Fei Z, Catala C, Giovannoni JJ, Rose JKC, Mueller LA. Fernandez-Pozo N, et al. Among authors: mueller la. Bioinformatics. 2017 Aug 1;33(15):2397-2398. doi: 10.1093/bioinformatics/btx190. Bioinformatics. 2017. PMID: 28379331 Free PMC article.
186 results