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ME-Class2 reveals context dependent regulatory roles for 5-hydroxymethylcytosine.
Nucleic Acids Res. 2019 Mar 18;47(5):e28. doi: 10.1093/nar/gkz001.
Nucleic Acids Res. 2019.
PMID: 30649543
Free PMC article.
Modeling complex patterns of differential DNA methylation that associate with gene expression changes.
Schlosberg CE, VanderKraats ND, Edwards JR.
Schlosberg CE, et al.
Nucleic Acids Res. 2017 May 19;45(9):5100-5111. doi: 10.1093/nar/gkx078.
Nucleic Acids Res. 2017.
PMID: 28168293
Free PMC article.
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p53 deficiency linked to B cell translocation gene 2 (BTG2) loss enhances metastatic potential by promoting tumor growth in primary and metastatic sites in patient-derived xenograft (PDX) models of triple-negative breast cancer.
Powell E, Shao J, Yuan Y, Chen HC, Cai S, Echeverria GV, Mistry N, Decker KF, Schlosberg C, Do KA, Edwards JR, Liang H, Piwnica-Worms D, Piwnica-Worms H.
Powell E, et al.
Breast Cancer Res. 2016 Jan 27;18(1):13. doi: 10.1186/s13058-016-0673-9.
Breast Cancer Res. 2016.
PMID: 26818199
Free PMC article.
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Endocrine-therapy-resistant ESR1 variants revealed by genomic characterization of breast-cancer-derived xenografts.
Li S, Shen D, Shao J, Crowder R, Liu W, Prat A, He X, Liu S, Hoog J, Lu C, Ding L, Griffith OL, Miller C, Larson D, Fulton RS, Harrison M, Mooney T, McMichael JF, Luo J, Tao Y, Goncalves R, Schlosberg C, Hiken JF, Saied L, Sanchez C, Giuntoli T, Bumb C, Cooper C, Kitchens RT, Lin A, Phommaly C, Davies SR, Zhang J, Kavuri MS, McEachern D, Dong YY, Ma C, Pluard T, Naughton M, Bose R, Suresh R, McDowell R, Michel L, Aft R, Gillanders W, DeSchryver K, Wilson RK, Wang S, Mills GB, Gonzalez-Angulo A, Edwards JR, Maher C, Perou CM, Mardis ER, Ellis MJ.
Li S, et al.
Cell Rep. 2013 Sep 26;4(6):1116-30. doi: 10.1016/j.celrep.2013.08.022. Epub 2013 Sep 19.
Cell Rep. 2013.
PMID: 24055055
Free PMC article.
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A functional genomic screen in vivo identifies CEACAM5 as a clinically relevant driver of breast cancer metastasis.
Powell E, Shao J, Picon HM, Bristow C, Ge Z, Peoples M, Robinson F, Jeter-Jones SL, Schlosberg C, Grzeskowiak CL, Yang F, Wu Y, Wistuba I, Moulder SL, Symmans WF, Scott KL, Edwards JR, Liang H, Heffernan TP, Piwnica-Worms H.
Powell E, et al.
NPJ Breast Cancer. 2018 Apr 30;4:9. doi: 10.1038/s41523-018-0062-x. eCollection 2018.
NPJ Breast Cancer. 2018.
PMID: 29736411
Free PMC article.
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Application of Bayesian network structure learning to identify causal variant SNPs from resequencing data.
Schlosberg CE, Schwantes-An TH, Duan W, Saccone NL.
Schlosberg CE, et al.
BMC Proc. 2011 Nov 29;5 Suppl 9(Suppl 9):S109. doi: 10.1186/1753-6561-5-S9-S109.
BMC Proc. 2011.
PMID: 22373088
Free PMC article.
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