González-Pech RA - Search Results

1

Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis.

Liu H, Stephens TG, González-Pech RA, Beltran VH, Lapeyre B, Bongaerts P, Cooke I, Aranda M, Bourne DG, Forêt S, Miller DJ, van Oppen MJH, Voolstra CR, Ragan MA, Chan CX. Liu H, et al. Commun Biol. 2018 Jul 17;1:95. doi: 10.1038/s42003-018-0098-3. eCollection 2018. Commun Biol. 2018. PMID: 30271976 Free PMC article.

2

Signatures of adaptation and symbiosis in genomes and transcriptomes of Symbiodinium.

González-Pech RA, Ragan MA, Chan CX. González-Pech RA, et al. Sci Rep. 2017 Nov 3;7(1):15021. doi: 10.1038/s41598-017-15029-w. Sci Rep. 2017. PMID: 29101370 Free PMC article.

3

Erratum: Publisher Correction: Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis.

Liu H, Stephens TG, González-Pech RA, Beltran VH, Lapeyre B, Bongaerts P, Cooke I, Aranda M, Bourne DG, Forêt S, Miller DJ, van Oppen MJH, Voolstra CR, Ragan MA, Chan CX. Liu H, et al. Among authors: gonzalez pech ra. Commun Biol. 2018 Aug 23;1:126. doi: 10.1038/s42003-018-0117-4. eCollection 2018. Commun Biol. 2018. PMID: 30273416 Free PMC article.

4

Commonly misunderstood parameters of NCBI BLAST and important considerations for users.

González-Pech RA, Stephens TG, Chan CX. González-Pech RA, et al. Bioinformatics. 2019 Aug 1;35(15):2697-2698. doi: 10.1093/bioinformatics/bty1018. Bioinformatics. 2019. PMID: 30541060 No abstract available.

5

Genome Evolution of Coral Reef Symbionts as Intracellular Residents.

González-Pech RA, Bhattacharya D, Ragan MA, Chan CX. González-Pech RA, et al. Trends Ecol Evol. 2019 Sep;34(9):799-806. doi: 10.1016/j.tree.2019.04.010. Epub 2019 May 10. Trends Ecol Evol. 2019. PMID: 31084944 Review.

6

Evidence That Inconsistent Gene Prediction Can Mislead Analysis of Dinoflagellate Genomes.

Chen Y, González-Pech RA, Stephens TG, Bhattacharya D, Chan CX. Chen Y, et al. Among authors: gonzalez pech ra. J Phycol. 2020 Feb;56(1):6-10. doi: 10.1111/jpy.12947. J Phycol. 2020. PMID: 31713873 Free PMC article.

7

Genomes of the dinoflagellate Polarella glacialis encode tandemly repeated single-exon genes with adaptive functions.

Stephens TG, González-Pech RA, Cheng Y, Mohamed AR, Burt DW, Bhattacharya D, Ragan MA, Chan CX. Stephens TG, et al. Among authors: gonzalez pech ra. BMC Biol. 2020 May 24;18(1):56. doi: 10.1186/s12915-020-00782-8. BMC Biol. 2020. PMID: 32448240 Free PMC article.

8

Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium.

González-Pech RA, Stephens TG, Chen Y, Mohamed AR, Cheng Y, Shah S, Dougan KE, Fortuin MDA, Lagorce R, Burt DW, Bhattacharya D, Ragan MA, Chan CX. González-Pech RA, et al. BMC Biol. 2021 Apr 13;19(1):73. doi: 10.1186/s12915-021-00994-6. BMC Biol. 2021. PMID: 33849527 Free PMC article.

9

Comparative Genomics Supports That Brazilian Bioethanol Saccharomyces cerevisiae Comprise a Unified Group of Domesticated Strains Related to Cachaça Spirit Yeasts.

Jacobus AP, Stephens TG, Youssef P, González-Pech R, Ciccotosto-Camp MM, Dougan KE, Chen Y, Basso LC, Frazzon J, Chan CX, Gross J. Jacobus AP, et al. Front Microbiol. 2021 Apr 15;12:644089. doi: 10.3389/fmicb.2021.644089. eCollection 2021. Front Microbiol. 2021. PMID: 33936002 Free PMC article.

10

Inferring Phylogenomic Relationship of Microbes Using Scalable Alignment-Free Methods.

Bernard G, Stephens TG, González-Pech RA, Chan CX. Bernard G, et al. Among authors: gonzalez pech ra. Methods Mol Biol. 2021;2242:69-76. doi: 10.1007/978-1-0716-1099-2_5. Methods Mol Biol. 2021. PMID: 33961218

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