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Transcriptomics and co-expression networks reveal tissue-specific responses and regulatory hubs under mild and severe drought in papaya (Carica papaya L.).
Sci Rep. 2018 Sep 28;8(1):14539. doi: 10.1038/s41598-018-32904-2.
Sci Rep. 2018.
PMID: 30267030
Free PMC article.
The SoNAP gene from sugarcane (Saccharum officinarum) encodes a senescence-associated NAC transcription factor involved in response to osmotic and salt stress.
Carrillo-Bermejo EA, Gamboa-Tuz SD, Pereira-Santana A, Keb-Llanes MA, Castaño E, Figueroa-Yañez LJ, Rodriguez-Zapata LC.
Carrillo-Bermejo EA, et al. Among authors: gamboa tuz sd.
J Plant Res. 2020 Nov;133(6):897-909. doi: 10.1007/s10265-020-01230-y. Epub 2020 Oct 23.
J Plant Res. 2020.
PMID: 33094397
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New insights into the phylogeny of the TMBIM superfamily across the tree of life: Comparative genomics and synteny networks reveal independent evolution of the BI and LFG families in plants.
Gamboa-Tuz SD, Pereira-Santana A, Zhao T, Schranz ME, Castano E, Rodriguez-Zapata LC.
Gamboa-Tuz SD, et al.
Mol Phylogenet Evol. 2018 Sep;126:266-278. doi: 10.1016/j.ympev.2018.04.032. Epub 2018 Apr 25.
Mol Phylogenet Evol. 2018.
PMID: 29702215
Free article.
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Fibrillarin evolution through the Tree of Life: Comparative genomics and microsynteny network analyses provide new insights into the evolutionary history of Fibrillarin.
Pereira-Santana A, Gamboa-Tuz SD, Zhao T, Schranz ME, Vinuesa P, Bayona A, Rodríguez-Zapata LC, Castano E.
Pereira-Santana A, et al. Among authors: gamboa tuz sd.
PLoS Comput Biol. 2020 Oct 19;16(10):e1008318. doi: 10.1371/journal.pcbi.1008318. eCollection 2020 Oct.
PLoS Comput Biol. 2020.
PMID: 33075080
Free PMC article.
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Phylogenomic and Microsynteny Analysis Provides Evidence of Genome Arrangements of High-Affinity Nitrate Transporter Gene Families of Plants.
Zoghbi-Rodríguez NM, Gamboa-Tuz SD, Pereira-Santana A, Rodríguez-Zapata LC, Sánchez-Teyer LF, Echevarría-Machado I.
Zoghbi-Rodríguez NM, et al. Among authors: gamboa tuz sd.
Int J Mol Sci. 2021 Dec 3;22(23):13036. doi: 10.3390/ijms222313036.
Int J Mol Sci. 2021.
PMID: 34884876
Free PMC article.
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Applying Synteny Networks (SynNet) to Study Genomic Arrangements of Protein-Coding Genes in Plants.
Gamboa-Tuz SD, Pereira-Santana A, Zhao T, Schranz ME.
Gamboa-Tuz SD, et al.
Methods Mol Biol. 2022;2512:199-215. doi: 10.1007/978-1-0716-2429-6_12.
Methods Mol Biol. 2022.
PMID: 35818007
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BugSigDB captures patterns of differential abundance across a broad range of host-associated microbial signatures.
Geistlinger L, Mirzayi C, Zohra F, Azhar R, Elsafoury S, Grieve C, Wokaty J, Gamboa-Tuz SD, Sengupta P, Hecht I, Ravikrishnan A, Gonçalves RS, Franzosa E, Raman K, Carey V, Dowd JB, Jones HE, Davis S, Segata N, Huttenhower C, Waldron L.
Geistlinger L, et al. Among authors: gamboa tuz sd.
Nat Biotechnol. 2024 May;42(5):790-802. doi: 10.1038/s41587-023-01872-y. Epub 2023 Sep 11.
Nat Biotechnol. 2024.
PMID: 37697152
Free PMC article.
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