Zhang TH - Search Results

1

High-Throughput Fitness Profiling of Zika Virus E Protein Reveals Different Roles for Glycosylation during Infection of Mammalian and Mosquito Cells.

Gong D, Zhang TH, Zhao D, Du Y, Chapa TJ, Shi Y, Wang L, Contreras D, Zeng G, Shi PY, Wu TT, Arumugaswami V, Sun R. Gong D, et al. Among authors: zhang th. iScience. 2018 Mar 23;1:97-111. doi: 10.1016/j.isci.2018.02.005. Epub 2018 Mar 23. iScience. 2018. PMID: 30227960 Free PMC article.

2

Coupling high-throughput genetics with phylogenetic information reveals an epistatic interaction on the influenza A virus M segment.

Wu NC, Du Y, Le S, Young AP, Zhang TH, Wang Y, Zhou J, Yoshizawa JM, Dong L, Li X, Wu TT, Sun R. Wu NC, et al. Among authors: zhang th. BMC Genomics. 2016 Jan 12;17:46. doi: 10.1186/s12864-015-2358-7. BMC Genomics. 2016. PMID: 26754751 Free PMC article.

3

A benchmark study on error-correction by read-pairing and tag-clustering in amplicon-based deep sequencing.

Zhang TH, Wu NC, Sun R. Zhang TH, et al. BMC Genomics. 2016 Feb 12;17:108. doi: 10.1186/s12864-016-2388-9. BMC Genomics. 2016. PMID: 26868371 Free PMC article.

4

Annotating Protein Functional Residues by Coupling High-Throughput Fitness Profile and Homologous-Structure Analysis.

Du Y, Wu NC, Jiang L, Zhang T, Gong D, Shu S, Wu TT, Sun R. Du Y, et al. mBio. 2016 Nov 1;7(6):e01801-16. doi: 10.1128/mBio.01801-16. mBio. 2016. PMID: 27803181 Free PMC article.

5

HIV-1 epitopes presented by MHC class I types associated with superior immune containment of viremia have highly constrained fitness landscapes.

Gorin AM, Du Y, Liu FY, Zhang TH, Ng HL, Hofmann C, Cumberland WG, Sun R, Yang OO. Gorin AM, et al. Among authors: zhang th. PLoS Pathog. 2017 Aug 7;13(8):e1006541. doi: 10.1371/journal.ppat.1006541. eCollection 2017 Aug. PLoS Pathog. 2017. PMID: 28787455 Free PMC article.

6

Quantifying perinatal transmission of Hepatitis B viral quasispecies by tag linkage deep sequencing.

Du Y, Chi X, Wang C, Jiang J, Kong F, Yan H, Wang X, Li J, Wu NC, Dai L, Zhang TH, Shu S, Zhou J, Yoshizawa JM, Li X, Bhattacharya D, Wu TT, Niu J, Sun R. Du Y, et al. Among authors: zhang th. Sci Rep. 2017 Aug 31;7(1):10168. doi: 10.1038/s41598-017-10591-9. Sci Rep. 2017. PMID: 28860476 Free PMC article.

7

Effects of Mutations on Replicative Fitness and Major Histocompatibility Complex Class I Binding Affinity Are Among the Determinants Underlying Cytotoxic-T-Lymphocyte Escape of HIV-1 Gag Epitopes.

Du Y, Zhang TH, Dai L, Zheng X, Gorin AM, Oishi J, Wu TT, Yoshizawa JM, Li X, Yang OO, Martinez-Maza O, Detels R, Sun R. Du Y, et al. Among authors: zhang th. mBio. 2017 Nov 28;8(6):e01050-17. doi: 10.1128/mBio.01050-17. mBio. 2017. PMID: 29184023 Free PMC article.

8

Genome-wide identification of interferon-sensitive mutations enables influenza vaccine design.

Du Y, Xin L, Shi Y, Zhang TH, Wu NC, Dai L, Gong D, Brar G, Shu S, Luo J, Reiley W, Tseng YW, Bai H, Wu TT, Wang J, Shu Y, Sun R. Du Y, et al. Among authors: zhang th. Science. 2018 Jan 19;359(6373):290-296. doi: 10.1126/science.aan8806. Science. 2018. PMID: 29348231

9

Emergence of Integrase Resistance Mutations During Initial Therapy Containing Dolutegravir.

Fulcher JA, Du Y, Zhang TH, Sun R, Landovitz RJ. Fulcher JA, et al. Among authors: zhang th. Clin Infect Dis. 2018 Aug 16;67(5):791-794. doi: 10.1093/cid/ciy228. Clin Infect Dis. 2018. PMID: 29933437 Free PMC article.

10

mRNA display with library of even-distribution reveals cellular interactors of influenza virus NS1.

Du Y, Hultquist JF, Zhou Q, Olson A, Tseng Y, Zhang TH, Hong M, Tang K, Chen L, Meng X, McGregor MJ, Dai L, Gong D, Martin-Sancho L, Chanda S, Li X, Bensenger S, Krogan NJ, Sun R. Du Y, et al. Among authors: zhang th. Nat Commun. 2020 May 15;11(1):2449. doi: 10.1038/s41467-020-16140-9. Nat Commun. 2020. PMID: 32415096 Free PMC article.

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