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Germline and Somatic NF1 Alterations Are Linked to Increased HER2 Expression in Breast Cancer.
Wang X, Kallionpää RA, Gonzales PR, Chitale DA, Tousignant RN, Crowley JP, Chen Z, Yoder SJ, Blakeley JO, Acosta MT, Korf BR, Messiaen LM, Tainsky MA. Wang X, et al. Among authors: chen z. Cancer Prev Res (Phila). 2018 Oct;11(10):655-664. doi: 10.1158/1940-6207.CAPR-18-0072. Epub 2018 Aug 13. Cancer Prev Res (Phila). 2018. PMID: 30104415 Free PMC article.
Breast cancer risk and germline genomic profiling of women with neurofibromatosis type 1 who developed breast cancer.
Wang X, Teer JK, Tousignant RN, Levin AM, Boulware D, Chitale DA, Shaw BM, Chen Z, Zhang Y, Blakeley JO, Acosta MT, Messiaen LM, Korf BR, Tainsky MA. Wang X, et al. Among authors: chen z. Genes Chromosomes Cancer. 2018 Jan;57(1):19-27. doi: 10.1002/gcc.22503. Epub 2017 Sep 30. Genes Chromosomes Cancer. 2018. PMID: 28891274 Free PMC article.
Proteogenomic landscape of squamous cell lung cancer.
Stewart PA, Welsh EA, Slebos RJC, Fang B, Izumi V, Chambers M, Zhang G, Cen L, Pettersson F, Zhang Y, Chen Z, Cheng CH, Thapa R, Thompson Z, Fellows KM, Francis JM, Saller JJ, Mesa T, Zhang C, Yoder S, DeNicola GM, Beg AA, Boyle TA, Teer JK, Ann Chen Y, Koomen JM, Eschrich SA, Haura EB. Stewart PA, et al. Among authors: chen z. Nat Commun. 2019 Aug 8;10(1):3578. doi: 10.1038/s41467-019-11452-x. Nat Commun. 2019. PMID: 31395880 Free PMC article.
LIN28B polymorphisms influence susceptibility to epithelial ovarian cancer.
Permuth-Wey J, Kim D, Tsai YY, Lin HY, Chen YA, Barnholtz-Sloan J, Birrer MJ, Bloom G, Chanock SJ, Chen Z, Cramer DW, Cunningham JM, Dagne G, Ebbert-Syfrett J, Fenstermacher D, Fridley BL, Garcia-Closas M, Gayther SA, Ge W, Gentry-Maharaj A, Gonzalez-Bosquet J, Goode EL, Iversen E, Jim H, Kong W, McLaughlin J, Menon U, Monteiro AN, Narod SA, Pharoah PD, Phelan CM, Qu X, Ramus SJ, Risch H, Schildkraut JM, Song H, Stockwell H, Sutphen R, Terry KL, Tyrer J, Vierkant RA, Wentzensen N, Lancaster JM, Cheng JQ, Sellers TA; Ovarian Cancer Association Consortium. Permuth-Wey J, et al. Among authors: chen z, chen ya. Cancer Res. 2011 Jun 1;71(11):3896-903. doi: 10.1158/0008-5472.CAN-10-4167. Epub 2011 Apr 11. Cancer Res. 2011. PMID: 21482675 Free PMC article.
MicroRNA processing and binding site polymorphisms are not replicated in the Ovarian Cancer Association Consortium.
Permuth-Wey J, Chen Z, Tsai YY, Lin HY, Chen YA, Barnholtz-Sloan J, Birrer MJ, Chanock SJ, Cramer DW, Cunningham JM, Fenstermacher D, Fridley BL, Garcia-Closas M, Gayther SA, Gentry-Maharaj A, Gonzalez-Bosquet J, Iversen E, Jim H, McLaughlin J, Menon U, Narod SA, Phelan CM, Ramus SJ, Risch H, Song H, Sutphen R, Terry KL, Tyrer J, Vierkant RA, Wentzensen N, Lancaster JM, Cheng JQ, Berchuck A, Pharoah PD, Schildkraut JM, Goode EL, Sellers TA; Ovarian Cancer Association Consortium (OCAC). Permuth-Wey J, et al. Among authors: chen z, chen ya. Cancer Epidemiol Biomarkers Prev. 2011 Aug;20(8):1793-7. doi: 10.1158/1055-9965.EPI-11-0397. Epub 2011 Jun 2. Cancer Epidemiol Biomarkers Prev. 2011. PMID: 21636674 Free PMC article.
Managing a Large-Scale Multiomics Project: A Team Science Case Study in Proteogenomics.
Stewart PA, Welsh EA, Fang B, Izumi V, Mesa T, Zhang C, Yoder S, Zhang G, Cen L, Pettersson F, Zhang Y, Chen Z, Cheng CH, Thapa R, Thompson Z, Avedon M, Wloch M, Fournier M, Fellows KM, Francis JM, Saller JJ, Boyle TA, Chen YA, Haura EB, Teer JK, Eschrich SA, Koomen JM. Stewart PA, et al. Among authors: chen z, chen ya. Methods Mol Biol. 2021;2194:187-221. doi: 10.1007/978-1-0716-0849-4_11. Methods Mol Biol. 2021. PMID: 32926368 Free PMC article.
Inherited variants in mitochondrial biogenesis genes may influence epithelial ovarian cancer risk.
Permuth-Wey J, Chen YA, Tsai YY, Chen Z, Qu X, Lancaster JM, Stockwell H, Dagne G, Iversen E, Risch H, Barnholtz-Sloan J, Cunningham JM, Vierkant RA, Fridley BL, Sutphen R, McLaughlin J, Narod SA, Goode EL, Schildkraut JM, Fenstermacher D, Phelan CM, Sellers TA. Permuth-Wey J, et al. Among authors: chen z, chen ya. Cancer Epidemiol Biomarkers Prev. 2011 Jun;20(6):1131-45. doi: 10.1158/1055-9965.EPI-10-1224. Epub 2011 Mar 29. Cancer Epidemiol Biomarkers Prev. 2011. PMID: 21447778 Free PMC article.
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