Zatopek K - Search Results

1

Enhancing Multistep DNA Processing by Solid-Phase Enzyme Catalysis on Polyethylene Glycol Coated Beads.

Li S, Zhang A, Zatopek K, Parvez S, Gardner AF, Corrêa IR Jr, Noren CJ, Xu MQ. Li S, et al. Among authors: zatopek k. Bioconjug Chem. 2018 Jul 18;29(7):2316-2324. doi: 10.1021/acs.bioconjchem.8b00299. Epub 2018 Jun 21. Bioconjug Chem. 2018. PMID: 29864273

2

Archaeal DNA replication and repair: new genetic, biophysical and molecular tools for discovering and characterizing enzymes, pathways and mechanisms.

Zatopek KM, Gardner AF, Kelman Z. Zatopek KM, et al. FEMS Microbiol Rev. 2018 Jul 1;42(4):477-488. doi: 10.1093/femsre/fuy017. FEMS Microbiol Rev. 2018. PMID: 29912309 Review.

3

Therminator DNA Polymerase: Modified Nucleotides and Unnatural Substrates.

Gardner AF, Jackson KM, Boyle MM, Buss JA, Potapov V, Gehring AM, Zatopek KM, Corrêa IR Jr, Ong JL, Jack WE. Gardner AF, et al. Among authors: zatopek km. Front Mol Biosci. 2019 Apr 24;6:28. doi: 10.3389/fmolb.2019.00028. eCollection 2019. Front Mol Biosci. 2019. PMID: 31069234 Free PMC article. Review.

4

RADAR-seq: A RAre DAmage and Repair sequencing method for detecting DNA damage on a genome-wide scale.

Zatopek KM, Potapov V, Maduzia LL, Alpaslan E, Chen L, Evans TC Jr, Ong JL, Ettwiller LM, Gardner AF. Zatopek KM, et al. DNA Repair (Amst). 2019 Aug;80:36-44. doi: 10.1016/j.dnarep.2019.06.007. Epub 2019 Jun 20. DNA Repair (Amst). 2019. PMID: 31247470 Free article.

5

Biochemical reconstitution and genetic characterization of the major oxidative damage base excision DNA repair pathway in Thermococcus kodakarensis.

Gehring AM, Zatopek KM, Burkhart BW, Potapov V, Santangelo TJ, Gardner AF. Gehring AM, et al. Among authors: zatopek km. DNA Repair (Amst). 2020 Feb;86:102767. doi: 10.1016/j.dnarep.2019.102767. Epub 2019 Dec 5. DNA Repair (Amst). 2020. PMID: 31841800 Free PMC article.

6

Novel ribonucleotide discrimination in the RNA polymerase-like two-barrel catalytic core of Family D DNA polymerases.

Zatopek KM, Alpaslan E, Evans TC, Sauguet L, Gardner AF. Zatopek KM, et al. Nucleic Acids Res. 2020 Dec 2;48(21):12204-12218. doi: 10.1093/nar/gkaa986. Nucleic Acids Res. 2020. PMID: 33137176 Free PMC article.

7

The Hyperthermophilic Restriction-Modification Systems of Thermococcus kodakarensis Protect Genome Integrity.

Zatopek KM, Burkhart BW, Morgan RD, Gehring AM, Scott KA, Santangelo TJ, Gardner AF. Zatopek KM, et al. Front Microbiol. 2021 May 20;12:657356. doi: 10.3389/fmicb.2021.657356. eCollection 2021. Front Microbiol. 2021. PMID: 34093470 Free PMC article.

8

Capillary Electrophoresis-Based Functional Genomics Screening to Discover Novel Archaeal DNA Modifying Enzymes.

Zatopek KM, Fossa SL, Bilotti K, Caffrey PJ, Chuzel L, Gehring AM, Lohman GJS, Taron CH, Gardner AF. Zatopek KM, et al. Appl Environ Microbiol. 2022 Jan 25;88(2):e0213721. doi: 10.1128/AEM.02137-21. Epub 2021 Nov 17. Appl Environ Microbiol. 2022. PMID: 34788065 Free PMC article.

9

Detection and Quantitation of DNA Damage on a Genome-wide Scale Using RADAR-seq.

Zatopek KM, Potapov V, Ong JL, Gardner AF. Zatopek KM, et al. Curr Protoc. 2022 Nov;2(11):e595. doi: 10.1002/cpz1.595. Curr Protoc. 2022. PMID: 36374013

10

An archaeal Cas3 protein facilitates rapid recovery from DNA damage.

Miezner G, Turgeman-Grott I, Zatopek KM, Gardner AF, Reshef L, Choudhary DK, Alstetter M, Allers T, Marchfelder A, Gophna U. Miezner G, et al. Among authors: zatopek km. Microlife. 2023 Feb 9;4:uqad007. doi: 10.1093/femsml/uqad007. eCollection 2023. Microlife. 2023. PMID: 37223740 Free PMC article.

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