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Fecal Microbiota Signatures Are Associated with Response to Ustekinumab Therapy among Crohn's Disease Patients.
mBio. 2018 Mar 13;9(2):e02120-17. doi: 10.1128/mBio.02120-17.
mBio. 2018.
PMID: 29535202
Free PMC article.
Diagnostic Potential and Interactive Dynamics of the Colorectal Cancer Virome.
Hannigan GD, Duhaime MB, Ruffin MT 4th, Koumpouras CC, Schloss PD.
Hannigan GD, et al. Among authors: koumpouras cc.
mBio. 2018 Nov 20;9(6):e02248-18. doi: 10.1128/mBio.02248-18.
mBio. 2018.
PMID: 30459201
Free PMC article.
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DNA from fecal immunochemical test can replace stool for detection of colonic lesions using a microbiota-based model.
Baxter NT, Koumpouras CC, Rogers MA, Ruffin MT 4th, Schloss PD.
Baxter NT, et al. Among authors: koumpouras cc.
Microbiome. 2016 Nov 14;4(1):59. doi: 10.1186/s40168-016-0205-y.
Microbiome. 2016.
PMID: 27842559
Free PMC article.
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Gut Microbiota Modulate CD8 T Cell Responses to Influence Colitis-Associated Tumorigenesis.
Yu AI, Zhao L, Eaton KA, Ho S, Chen J, Poe S, Becker J, Gonzalez A, McKinstry D, Hasso M, Mendoza-Castrejon J, Whitfield J, Koumpouras C, Schloss PD, Martens EC, Chen GY.
Yu AI, et al. Among authors: koumpouras c.
Cell Rep. 2020 Apr 7;31(1):107471. doi: 10.1016/j.celrep.2020.03.035.
Cell Rep. 2020.
PMID: 32268087
Free PMC article.
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Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system.
Schloss PD, Jenior ML, Koumpouras CC, Westcott SL, Highlander SK.
Schloss PD, et al. Among authors: koumpouras cc.
PeerJ. 2016 Mar 28;4:e1869. doi: 10.7717/peerj.1869. eCollection 2016.
PeerJ. 2016.
PMID: 27069806
Free PMC article.
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Ten simple rules to increase computational skills among biologists with Code Clubs.
Hagan AK, Lesniak NA, Balunas MJ, Bishop L, Close WL, Doherty MD, Elmore AG, Flynn KJ, Hannigan GD, Koumpouras CC, Jenior ML, Kozik AJ, McBride K, Rifkin SB, Stough JMA, Sovacool KL, Sze MA, Tomkovich S, Topcuoglu BD, Schloss PD.
Hagan AK, et al. Among authors: koumpouras cc.
PLoS Comput Biol. 2020 Aug 27;16(8):e1008119. doi: 10.1371/journal.pcbi.1008119. eCollection 2020 Aug.
PLoS Comput Biol. 2020.
PMID: 32853198
Free PMC article.
No abstract available.
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Cefoperazone-treated mice as an experimental platform to assess differential virulence of Clostridium difficile strains.
Theriot CM, Koumpouras CC, Carlson PE, Bergin II, Aronoff DM, Young VB.
Theriot CM, et al. Among authors: koumpouras cc.
Gut Microbes. 2011 Nov-Dec;2(6):326-34. doi: 10.4161/gmic.19142. Epub 2011 Nov 1.
Gut Microbes. 2011.
PMID: 22198617
Free PMC article.
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