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Using Genetic Distance from Archived Samples for the Prediction of Antibiotic Resistance in Escherichia coli.
MacFadden DR, Coburn B, Břinda K, Corbeil A, Daneman N, Fisman D, Lee RS, Lipsitch M, McGeer A, Melano RG, Mubareka S, Hanage WP. MacFadden DR, et al. Among authors: hanage wp. Antimicrob Agents Chemother. 2020 Apr 21;64(5):e02417-19. doi: 10.1128/AAC.02417-19. Print 2020 Apr 21. Antimicrob Agents Chemother. 2020. PMID: 32152083 Free PMC article.
Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing.
Břinda K, Callendrello A, Ma KC, MacFadden DR, Charalampous T, Lee RS, Cowley L, Wadsworth CB, Grad YH, Kucherov G, O'Grady J, Baym M, Hanage WP. Břinda K, et al. Among authors: hanage wp. Nat Microbiol. 2020 Mar;5(3):455-464. doi: 10.1038/s41564-019-0656-6. Epub 2020 Feb 10. Nat Microbiol. 2020. PMID: 32042129 Free PMC article.
Understanding Early Pandemic Severe Acute Respiratory Syndrome Coronavirus 2 Transmission in a Medical Center by Incorporating Public Sequencing Databases to Mitigate Bias.
Turcinovic J, Schaeffer B, Taylor BP, Bouton TC, Odom-Mabey AR, Weber SE, Lodi S, Ragan EJ, Connor JH, Jacobson KR, Hanage WP. Turcinovic J, et al. Among authors: hanage wp. J Infect Dis. 2022 Nov 11;226(10):1704-1711. doi: 10.1093/infdis/jiac348. J Infect Dis. 2022. PMID: 35993116 Free PMC article.
225 results