Oda M - Search Results

1

RecA requires two molecules of Mg2+ ions for its optimal strand exchange activity in vitro.

Kim R, Kanamaru S, Mikawa T, Prévost C, Ishii K, Ito K, Uchiyama S, Oda M, Iwasaki H, Kim SK, Takahashi M. Kim R, et al. Among authors: oda m. Nucleic Acids Res. 2018 Mar 16;46(5):2548-2559. doi: 10.1093/nar/gky048. Nucleic Acids Res. 2018. PMID: 29390145 Free PMC article.

2

Generation of monoclonal antibodies against chromosomal antigens that have a high sequence similarity between human and mouse.

Higashi T, Miyakawa S, Uchiyama S, Matsunaga S, Takata H, Fujimoto S, Noda M, Terauchi A, Shimizu T, Oda M, Azuma T, Fukui K. Higashi T, et al. Among authors: oda m. J Biotechnol. 2005 Nov 21;120(3):262-72. doi: 10.1016/j.jbiotec.2005.06.036. Epub 2005 Sep 19. J Biotechnol. 2005. PMID: 16171883

3

Regional and segmental flexibility of antibodies in interaction with antigens of different size.

Oda M, Uchiyama S, Robinson CV, Fukui K, Kobayashi Y, Azuma T. Oda M, et al. FEBS J. 2006 Apr;273(7):1476-87. doi: 10.1111/j.1742-4658.2006.05168.x. FEBS J. 2006. PMID: 16689933 Free article.

4

Crystallization and preliminary X-ray analysis of the complex of NADH and 3alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831.

Kataoka S, Nakamura S, Ohkubo T, Ueda S, Uchiyama S, Kobayashi Y, Oda M. Kataoka S, et al. Among authors: oda m. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Jun 1;62(Pt 6):569-71. doi: 10.1107/S1744309106016861. Epub 2006 May 31. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006. PMID: 16754984 Free PMC article.

5

Apo- and holo-structures of 3alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831. Loop-helix transition induced by coenzyme binding.

Nakamura S, Oda M, Kataoka S, Ueda S, Uchiyama S, Yoshida T, Kobayashi Y, Ohkubo T. Nakamura S, et al. Among authors: oda m. J Biol Chem. 2006 Oct 20;281(42):31876-84. doi: 10.1074/jbc.M604226200. Epub 2006 Aug 12. J Biol Chem. 2006. PMID: 16905772 Free article.

6

Effects of antibody affinity and antigen valence on molecular forms of immune complexes.

Oda M, Uchiyama S, Noda M, Nishi Y, Koga M, Mayanagi K, Robinson CV, Fukui K, Kobayashi Y, Morikawa K, Azuma T. Oda M, et al. Mol Immunol. 2009 Dec;47(2-3):357-64. doi: 10.1016/j.molimm.2009.09.009. Epub 2009 Oct 2. Mol Immunol. 2009. PMID: 19800690

7

Creation of a type 1 blue copper site within a de novo coiled-coil protein scaffold.

Shiga D, Nakane D, Inomata T, Funahashi Y, Masuda H, Kikuchi A, Oda M, Noda M, Uchiyama S, Fukui K, Kanaori K, Tajima K, Takano Y, Nakamura H, Tanaka T. Shiga D, et al. Among authors: oda m. J Am Chem Soc. 2010 Dec 29;132(51):18191-8. doi: 10.1021/ja106263y. Epub 2010 Dec 2. J Am Chem Soc. 2010. PMID: 21126081

8

Structural and binding properties of laminarin revealed by analytical ultracentrifugation and calorimetric analyses.

Oda M, Tanabe Y, Noda M, Inaba S, Krayukhina E, Fukada H, Uchiyama S. Oda M, et al. Carbohydr Res. 2016 Aug 5;431:33-8. doi: 10.1016/j.carres.2016.05.008. Epub 2016 May 26. Carbohydr Res. 2016. PMID: 27267066

9

Entire-Dataset Analysis of NMR Fast-Exchange Titration Spectra: A Mg²⁺ Titration Analysis for HIV-1 Ribonuclease H Domain.

Karki I, Christen MT, Spiriti J, Slack RL, Oda M, Kanaori K, Zuckerman DM, Ishima R. Karki I, et al. Among authors: oda m. J Phys Chem B. 2016 Dec 15;120(49):12420-12431. doi: 10.1021/acs.jpcb.6b08323. Epub 2016 Dec 5. J Phys Chem B. 2016. PMID: 27973819 Free PMC article.

10

Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca²⁺-Driven Catalytic Cycle.

Numoto N, Kamiya N, Bekker GJ, Yamagami Y, Inaba S, Ishii K, Uchiyama S, Kawai F, Ito N, Oda M. Numoto N, et al. Among authors: oda m. Biochemistry. 2018 Sep 11;57(36):5289-5300. doi: 10.1021/acs.biochem.8b00624. Epub 2018 Aug 27. Biochemistry. 2018. PMID: 30110540

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