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Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity.
Edger PP, VanBuren R, Colle M, Poorten TJ, Wai CM, Niederhuth CE, Alger EI, Ou S, Acharya CB, Wang J, Callow P, McKain MR, Shi J, Collier C, Xiong Z, Mower JP, Slovin JP, Hytönen T, Jiang N, Childs KL, Knapp SJ. Edger PP, et al. Among authors: niederhuth ce. Gigascience. 2018 Feb 1;7(2):1-7. doi: 10.1093/gigascience/gix124. Gigascience. 2018. PMID: 29253147 Free PMC article.
The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut.
Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, Abernathy B, Chu Y, Niederhuth CE, Umale P, Araújo AC, Kozik A, Kim KD, Burow MD, Varshney RK, Wang X, Zhang X, Barkley N, Guimarães PM, Isobe S, Guo B, Liao B, Stalker HT, Schmitz RJ, Scheffler BE, Leal-Bertioli SC, Xun X, Jackson SA, Michelmore R, Ozias-Akins P. Bertioli DJ, et al. Among authors: niederhuth ce. Nat Genet. 2016 Apr;48(4):438-46. doi: 10.1038/ng.3517. Epub 2016 Feb 22. Nat Genet. 2016. PMID: 26901068 Free article.
Intertwined evolution of plant epigenomes and genomes.
Ritter EJ, Niederhuth CE. Ritter EJ, et al. Among authors: niederhuth ce. Curr Opin Plant Biol. 2021 Jun;61:101990. doi: 10.1016/j.pbi.2020.101990. Epub 2021 Jan 11. Curr Opin Plant Biol. 2021. PMID: 33445143 Review.
pENCODE: a plant encyclopedia of DNA elements.
Lane AK, Niederhuth CE, Ji L, Schmitz RJ. Lane AK, et al. Among authors: niederhuth ce. Annu Rev Genet. 2014;48:49-70. doi: 10.1146/annurev-genet-120213-092443. Epub 2014 Aug 15. Annu Rev Genet. 2014. PMID: 25149370 Free PMC article. Review.
26 results