de Figueiredo LF - Search Results

1

nmrML: A Community Supported Open Data Standard for the Description, Storage, and Exchange of NMR Data.

Schober D, Jacob D, Wilson M, Cruz JA, Marcu A, Grant JR, Moing A, Deborde C, de Figueiredo LF, Haug K, Rocca-Serra P, Easton J, Ebbels TMD, Hao J, Ludwig C, Günther UL, Rosato A, Klein MS, Lewis IA, Luchinat C, Jones AR, Grauslys A, Larralde M, Yokochi M, Kobayashi N, Porzel A, Griffin JL, Viant MR, Wishart DS, Steinbeck C, Salek RM, Neumann S. Schober D, et al. Among authors: de figueiredo lf. Anal Chem. 2018 Jan 2;90(1):649-656. doi: 10.1021/acs.analchem.7b02795. Epub 2017 Dec 14. Anal Chem. 2018. PMID: 29035042 Free article.

2

KNIME-CDK: Workflow-driven cheminformatics.

Beisken S, Meinl T, Wiswedel B, de Figueiredo LF, Berthold M, Steinbeck C. Beisken S, et al. Among authors: de figueiredo lf. BMC Bioinformatics. 2013 Aug 22;14:257. doi: 10.1186/1471-2105-14-257. BMC Bioinformatics. 2013. PMID: 24103053 Free PMC article.

3

Can sugars be produced from fatty acids? A test case for pathway analysis tools.

de Figueiredo LF, Schuster S, Kaleta C, Fell DA. de Figueiredo LF, et al. Bioinformatics. 2009 Jan 1;25(1):152-8. doi: 10.1093/bioinformatics/btn621. Bioinformatics. 2009. PMID: 19117076

4

Can sugars be produced from fatty acids? A test case for pathway analysis tools.

de Figueiredo LF, Schuster S, Kaleta C, Fell DA. de Figueiredo LF, et al. Bioinformatics. 2008 Nov 15;24(22):2615-21. doi: 10.1093/bioinformatics/btn500. Epub 2008 Sep 19. Bioinformatics. 2008. PMID: 18806269 Corrected and republished.

5

Response to comment on 'Can sugars be produced from fatty acids? A test case for pathway analysis tools'.

de Figueiredo LF, Schuster S, Kaleta C, Fell DA. de Figueiredo LF, et al. Bioinformatics. 2009 Dec 15;25(24):3330-1. doi: 10.1093/bioinformatics/btp591. Epub 2009 Oct 13. Bioinformatics. 2009. PMID: 19825797 No abstract available.

6

Predicting novel pathways in genome-scale metabolic networks.

Schuster S, de Figueiredo LF, Kaleta C. Schuster S, et al. Among authors: de figueiredo lf. Biochem Soc Trans. 2010 Oct;38(5):1202-5. doi: 10.1042/BST0381202. Biochem Soc Trans. 2010. PMID: 20863284

7

Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria.

Pande S, Merker H, Bohl K, Reichelt M, Schuster S, de Figueiredo LF, Kaleta C, Kost C. Pande S, et al. Among authors: de figueiredo lf. ISME J. 2014 May;8(5):953-62. doi: 10.1038/ismej.2013.211. Epub 2013 Nov 28. ISME J. 2014. PMID: 24285359 Free PMC article.

8

Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.

Kaleta C, de Figueiredo LF, Schuster S. Kaleta C, et al. Among authors: de figueiredo lf. Genome Res. 2009 Oct;19(10):1872-83. doi: 10.1101/gr.090639.108. Epub 2009 Jun 18. Genome Res. 2009. PMID: 19541909 Free PMC article.

9

Computing the shortest elementary flux modes in genome-scale metabolic networks.

de Figueiredo LF, Podhorski A, Rubio A, Kaleta C, Beasley JE, Schuster S, Planes FJ. de Figueiredo LF, et al. Bioinformatics. 2009 Dec 1;25(23):3158-65. doi: 10.1093/bioinformatics/btp564. Epub 2009 Sep 30. Bioinformatics. 2009. PMID: 19793869

10

In silico evidence for gluconeogenesis from fatty acids in humans.

Kaleta C, de Figueiredo LF, Werner S, Guthke R, Ristow M, Schuster S. Kaleta C, et al. Among authors: de figueiredo lf. PLoS Comput Biol. 2011 Jul;7(7):e1002116. doi: 10.1371/journal.pcbi.1002116. Epub 2011 Jul 21. PLoS Comput Biol. 2011. PMID: 21814506 Free PMC article.

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