Kotulska M - Search Results

1

Amyloidogenic motifs revealed by n-gram analysis.

Burdukiewicz M, Sobczyk P, Rödiger S, Duda-Madej A, Mackiewicz P, Kotulska M. Burdukiewicz M, et al. Among authors: kotulska m. Sci Rep. 2017 Oct 11;7(1):12961. doi: 10.1038/s41598-017-13210-9. Sci Rep. 2017. PMID: 29021608 Free PMC article.

2

Machine learning methods can replace 3D profile method in classification of amyloidogenic hexapeptides.

Stanislawski J, Kotulska M, Unold O. Stanislawski J, et al. Among authors: kotulska m. BMC Bioinformatics. 2013 Jan 17;14:21. doi: 10.1186/1471-2105-14-21. BMC Bioinformatics. 2013. PMID: 23327628 Free PMC article.

3

FISH Amyloid - a new method for finding amyloidogenic segments in proteins based on site specific co-occurrence of aminoacids.

Gasior P, Kotulska M. Gasior P, et al. Among authors: kotulska m. BMC Bioinformatics. 2014 Feb 24;15:54. doi: 10.1186/1471-2105-15-54. BMC Bioinformatics. 2014. PMID: 24564523 Free PMC article.

4

PATH - Prediction of Amyloidogenicity by Threading and Machine Learning.

Wojciechowski JW, Kotulska M. Wojciechowski JW, et al. Among authors: kotulska m. Sci Rep. 2020 May 7;10(1):7721. doi: 10.1038/s41598-020-64270-3. Sci Rep. 2020. PMID: 32382058 Free PMC article.

5

Bioinformatics methods for identification of amyloidogenic peptides show robustness to misannotated training data.

Szulc N, Burdukiewicz M, Gąsior-Głogowska M, Wojciechowski JW, Chilimoniuk J, Mackiewicz P, Šneideris T, Smirnovas V, Kotulska M. Szulc N, et al. Among authors: kotulska m. Sci Rep. 2021 Apr 26;11(1):8934. doi: 10.1038/s41598-021-86530-6. Sci Rep. 2021. PMID: 33903613 Free PMC article.

6

Variability of Amyloid Propensity in Imperfect Repeats of CsgA Protein of Salmonella enterica and Escherichia coli.

Szulc N, Gąsior-Głogowska M, Wojciechowski JW, Szefczyk M, Żak AM, Burdukiewicz M, Kotulska M. Szulc N, et al. Among authors: kotulska m. Int J Mol Sci. 2021 May 12;22(10):5127. doi: 10.3390/ijms22105127. Int J Mol Sci. 2021. PMID: 34066237 Free PMC article.

7

Bioinformatics Methods in Predicting Amyloid Propensity of Peptides and Proteins.

Kotulska M, Wojciechowski JW. Kotulska M, et al. Methods Mol Biol. 2022;2340:1-15. doi: 10.1007/978-1-0716-1546-1_1. Methods Mol Biol. 2022. PMID: 35167067

8

AmyloGraph: a comprehensive database of amyloid-amyloid interactions.

Burdukiewicz M, Rafacz D, Barbach A, Hubicka K, Bąkała L, Lassota A, Stecko J, Szymańska N, Wojciechowski JW, Kozakiewicz D, Szulc N, Chilimoniuk J, Jęśkowiak I, Gąsior-Głogowska M, Kotulska M. Burdukiewicz M, et al. Among authors: kotulska m. Nucleic Acids Res. 2023 Jan 6;51(D1):D352-D357. doi: 10.1093/nar/gkac882. Nucleic Acids Res. 2023. PMID: 36243982 Free PMC article.

9

PACT - Prediction of amyloid cross-interaction by threading.

Wojciechowski JW, Szczurek W, Szulc N, Szefczyk M, Kotulska M. Wojciechowski JW, et al. Among authors: kotulska m. Sci Rep. 2023 Dec 14;13(1):22268. doi: 10.1038/s41598-023-48886-9. Sci Rep. 2023. PMID: 38097650 Free PMC article.

10

Structural effects of charge destabilization and amino acid substitutions in amyloid fragments of CsgA.

Szulc N, Gąsior-Głogowska M, Żyłka P, Szefczyk M, Wojciechowski JW, Żak AM, Dyrka W, Kaczorowska A, Burdukiewicz M, Tarek M, Kotulska M. Szulc N, et al. Among authors: kotulska m. Spectrochim Acta A Mol Biomol Spectrosc. 2024 May 15;313:124094. doi: 10.1016/j.saa.2024.124094. Epub 2024 Mar 6. Spectrochim Acta A Mol Biomol Spectrosc. 2024. PMID: 38503257

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

62 results

Search Page