Tiedje JM - Search Results

1

Hypoxia and Inactivity Related Physiological Changes (Constipation, Inflammation) Are Not Reflected at the Level of Gut Metabolites and Butyrate Producing Microbial Community: The PlanHab Study.

Šket R, Treichel N, Debevec T, Eiken O, Mekjavic I, Schloter M, Vital M, Chandler J, Tiedje JM, Murovec B, Prevoršek Z, Stres B. Šket R, et al. Among authors: tiedje jm. Front Physiol. 2017 May 4;8:250. doi: 10.3389/fphys.2017.00250. eCollection 2017. Front Physiol. 2017. PMID: 28522975 Free PMC article.

2

Nitrous oxide reductase (nosZ) gene fragments differ between native and cultivated Michigan soils.

Stres B, Mahne I, Avgustin G, Tiedje JM. Stres B, et al. Among authors: tiedje jm. Appl Environ Microbiol. 2004 Jan;70(1):301-9. doi: 10.1128/AEM.70.1.301-309.2004. Appl Environ Microbiol. 2004. PMID: 14711656 Free PMC article.

3

BEsTRF: a tool for optimal resolution of terminal-restriction fragment length polymorphism analysis based on user-defined primer-enzyme-sequence databases.

Stres B, Tiedje JM, Murovec B. Stres B, et al. Among authors: tiedje jm. Bioinformatics. 2009 Jun 15;25(12):1556-8. doi: 10.1093/bioinformatics/btp254. Epub 2009 Apr 15. Bioinformatics. 2009. PMID: 19369501

4

DNA encoding for an efficient 'Omics processing.

Murovec B, Tiedje JM, Stres B. Murovec B, et al. Among authors: tiedje jm. Comput Methods Programs Biomed. 2010 Nov;100(2):175-90. doi: 10.1016/j.cmpb.2010.03.014. Epub 2010 May 4. Comput Methods Programs Biomed. 2010. PMID: 20444519

5

Frequent freeze-thaw cycles yield diminished yet resistant and responsive microbial communities in two temperate soils: a laboratory experiment.

Stres B, Philippot L, Faganeli J, Tiedje JM. Stres B, et al. Among authors: tiedje jm. FEMS Microbiol Ecol. 2010 Nov;74(2):323-35. doi: 10.1111/j.1574-6941.2010.00951.x. Epub 2010 Aug 23. FEMS Microbiol Ecol. 2010. PMID: 20735477 Free article.

6

Recently deglaciated high-altitude soils of the Himalaya: diverse environments, heterogenous bacterial communities and long-range dust inputs from the upper troposphere.

Stres B, Sul WJ, Murovec B, Tiedje JM. Stres B, et al. Among authors: tiedje jm. PLoS One. 2013 Sep 26;8(9):e76440. doi: 10.1371/journal.pone.0076440. eCollection 2013. PLoS One. 2013. PMID: 24086740 Free PMC article.

7

A gene-targeted approach to investigate the intestinal butyrate-producing bacterial community.

Vital M, Penton CR, Wang Q, Young VB, Antonopoulos DA, Sogin ML, Morrison HG, Raffals L, Chang EB, Huffnagle GB, Schmidt TM, Cole JR, Tiedje JM. Vital M, et al. Among authors: tiedje jm. Microbiome. 2013 Mar 4;1(1):8. doi: 10.1186/2049-2618-1-8. Microbiome. 2013. PMID: 24451334 Free PMC article.

8

Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data.

Vital M, Howe AC, Tiedje JM. Vital M, et al. Among authors: tiedje jm. mBio. 2014 Apr 22;5(2):e00889. doi: 10.1128/mBio.00889-14. mBio. 2014. PMID: 24757212 Free PMC article.

9

Gene expression analysis of E. coli strains provides insights into the role of gene regulation in diversification.

Vital M, Chai B, Østman B, Cole J, Konstantinidis KT, Tiedje JM. Vital M, et al. Among authors: tiedje jm. ISME J. 2015 May;9(5):1130-40. doi: 10.1038/ismej.2014.204. Epub 2014 Oct 24. ISME J. 2015. PMID: 25343512 Free PMC article.

10

Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia.

Vital M, Gao J, Rizzo M, Harrison T, Tiedje JM. Vital M, et al. Among authors: tiedje jm. ISME J. 2015 Mar 17;9(4):832-43. doi: 10.1038/ismej.2014.179. ISME J. 2015. PMID: 25343515 Free PMC article.

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