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Draft genome of the lined seahorse, Hippocampus erectus.
Lin Q, Qiu Y, Gu R, Xu M, Li J, Bian C, Zhang H, Qin G, Zhang Y, Luo W, Chen J, You X, Fan M, Sun M, Xu P, Venkatesh B, Xu J, Fu H, Shi Q. Lin Q, et al. Among authors: venkatesh b. Gigascience. 2017 Jun 1;6(6):1-6. doi: 10.1093/gigascience/gix030. Gigascience. 2017. PMID: 28444302 Free PMC article.
Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes.
You X, Bian C, Zan Q, Xu X, Liu X, Chen J, Wang J, Qiu Y, Li W, Zhang X, Sun Y, Chen S, Hong W, Li Y, Cheng S, Fan G, Shi C, Liang J, Tom Tang Y, Yang C, Ruan Z, Bai J, Peng C, Mu Q, Lu J, Fan M, Yang S, Huang Z, Jiang X, Fang X, Zhang G, Zhang Y, Polgar G, Yu H, Li J, Liu Z, Zhang G, Ravi V, Coon SL, Wang J, Yang H, Venkatesh B, Wang J, Shi Q. You X, et al. Among authors: venkatesh b. Nat Commun. 2014 Dec 2;5:5594. doi: 10.1038/ncomms6594. Nat Commun. 2014. PMID: 25463417 Free PMC article.
The Asian arowana (Scleropages formosus) genome provides new insights into the evolution of an early lineage of teleosts.
Bian C, Hu Y, Ravi V, Kuznetsova IS, Shen X, Mu X, Sun Y, You X, Li J, Li X, Qiu Y, Tay BH, Thevasagayam NM, Komissarov AS, Trifonov V, Kabilov M, Tupikin A, Luo J, Liu Y, Song H, Liu C, Wang X, Gu D, Yang Y, Li W, Polgar G, Fan G, Zeng P, Zhang H, Xiong Z, Tang Z, Peng C, Ruan Z, Yu H, Chen J, Fan M, Huang Y, Wang M, Zhao X, Hu G, Yang H, Wang J, Wang J, Xu X, Song L, Xu G, Xu P, Xu J, O'Brien SJ, Orbán L, Venkatesh B, Shi Q. Bian C, et al. Among authors: venkatesh b. Sci Rep. 2016 Apr 19;6:24501. doi: 10.1038/srep24501. Sci Rep. 2016. PMID: 27089831 Free PMC article.
Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies.
Sun Y, Huang Y, Li X, Baldwin CC, Zhou Z, Yan Z, Crandall KA, Zhang Y, Zhao X, Wang M, Wong A, Fang C, Zhang X, Huang H, Lopez JV, Kilfoyle K, Zhang Y, Ortí G, Venkatesh B, Shi Q. Sun Y, et al. Among authors: venkatesh b. Gigascience. 2016 May 3;5:18. doi: 10.1186/s13742-016-0124-7. eCollection 2016. Gigascience. 2016. PMID: 27144000 Free PMC article.
A chromosome-level genome assembly of the Asian arowana, Scleropages formosus.
Li J, Bian C, Hu Y, Mu X, Shen X, Ravi V, Kuznetsova IS, Sun Y, You X, Qiu Y, Zhang X, Yu H, Huang Y, Xu P, Gu R, Xu J, Orbán L, Venkatesh B, Shi Q. Li J, et al. Among authors: venkatesh b. Sci Data. 2016 Dec 6;3:160105. doi: 10.1038/sdata.2016.105. Sci Data. 2016. PMID: 27922628 Free PMC article.
The seahorse genome and the evolution of its specialized morphology.
Lin Q, Fan S, Zhang Y, Xu M, Zhang H, Yang Y, Lee AP, Woltering JM, Ravi V, Gunter HM, Luo W, Gao Z, Lim ZW, Qin G, Schneider RF, Wang X, Xiong P, Li G, Wang K, Min J, Zhang C, Qiu Y, Bai J, He W, Bian C, Zhang X, Shan D, Qu H, Sun Y, Gao Q, Huang L, Shi Q, Meyer A, Venkatesh B. Lin Q, et al. Among authors: venkatesh b. Nature. 2016 Dec 14;540(7633):395-399. doi: 10.1038/nature20595. Nature. 2016. PMID: 27974754 Free PMC article.
Lampreys, the jawless vertebrates, contain only two ParaHox gene clusters.
Zhang H, Ravi V, Tay BH, Tohari S, Pillai NE, Prasad A, Lin Q, Brenner S, Venkatesh B. Zhang H, et al. Among authors: venkatesh b. Proc Natl Acad Sci U S A. 2017 Aug 22;114(34):9146-9151. doi: 10.1073/pnas.1704457114. Epub 2017 Aug 7. Proc Natl Acad Sci U S A. 2017. PMID: 28784804 Free PMC article.
Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data.
Hughes LC, Ortí G, Huang Y, Sun Y, Baldwin CC, Thompson AW, Arcila D, Betancur-R R, Li C, Becker L, Bellora N, Zhao X, Li X, Wang M, Fang C, Xie B, Zhou Z, Huang H, Chen S, Venkatesh B, Shi Q. Hughes LC, et al. Among authors: venkatesh b. Proc Natl Acad Sci U S A. 2018 Jun 12;115(24):6249-6254. doi: 10.1073/pnas.1719358115. Epub 2018 May 14. Proc Natl Acad Sci U S A. 2018. PMID: 29760103 Free PMC article.
657 results