Kramer A - Search Results

1

Lessons from the CAGI-4 Hopkins clinical panel challenge.

Chandonia JM, Adhikari A, Carraro M, Chhibber A, Cutting GR, Fu Y, Gasparini A, Jones DT, Kramer A, Kundu K, Lam HYK, Leonardi E, Moult J, Pal LR, Searls DB, Shah S, Sunyaev S, Tosatto SCE, Yin Y, Buckley BA. Chandonia JM, et al. Among authors: kramer a. Hum Mutat. 2017 Sep;38(9):1155-1168. doi: 10.1002/humu.23225. Epub 2017 Jun 12. Hum Mutat. 2017. PMID: 28397312 Free PMC article.

2

Leveraging network analytics to infer patient syndrome and identify causal genes in rare disease cases.

Krämer A, Shah S, Rebres RA, Tang S, Richards DR. Krämer A, et al. BMC Genomics. 2017 Aug 11;18(Suppl 5):551. doi: 10.1186/s12864-017-3910-4. BMC Genomics. 2017. PMID: 28812537 Free PMC article.

3

Master regulators as order parameters of gene expression states.

Krämer A. Krämer A. Phys Rev E. 2021 Jan;103(1-1):012409. doi: 10.1103/PhysRevE.103.012409. Phys Rev E. 2021. PMID: 33601603

4

From data to discovery: AI-guided analysis of disease-relevant molecules in spinal muscular atrophy (SMA).

Tapken I, Kuhn D, Hoffmann N, Detering NT, Schüning T, Billaud JN, Tugendreich S, Schlüter N, Green J, Krämer A, Claus P. Tapken I, et al. Among authors: kramer a. Hum Mol Genet. 2024 May 4:ddae076. doi: 10.1093/hmg/ddae076. Online ahead of print. Hum Mol Genet. 2024. PMID: 38704739

5

Causal analysis approaches in Ingenuity Pathway Analysis.

Krämer A, Green J, Pollard J Jr, Tugendreich S. Krämer A, et al. Bioinformatics. 2014 Feb 15;30(4):523-30. doi: 10.1093/bioinformatics/btt703. Epub 2013 Dec 13. Bioinformatics. 2014. PMID: 24336805 Free PMC article.

6

Predictive systems biology approach to broad-spectrum, host-directed drug target discovery in infectious diseases.

Felciano RM, Bavari S, Richards DR, Billaud JN, Warren T, Panchal R, Krämer A. Felciano RM, et al. Among authors: kramer a. Pac Symp Biocomput. 2013:17-28. Pac Symp Biocomput. 2013. PMID: 23424108 Free article.

7

Mining hidden knowledge: embedding models of cause-effect relationships curated from the biomedical literature.

Krämer A, Green J, Billaud JN, Pasare NA, Jones M, Tugendreich S. Krämer A, et al. Bioinform Adv. 2022 Apr 7;2(1):vbac022. doi: 10.1093/bioadv/vbac022. eCollection 2022. Bioinform Adv. 2022. PMID: 36699407 Free PMC article.

8

The Coronavirus Network Explorer: mining a large-scale knowledge graph for effects of SARS-CoV-2 on host cell function.

Krämer A, Billaud JN, Tugendreich S, Shiffman D, Jones M, Green J. Krämer A, et al. BMC Bioinformatics. 2021 May 3;22(1):229. doi: 10.1186/s12859-021-04148-x. BMC Bioinformatics. 2021. PMID: 33941085 Free PMC article.

9

Physical exercise, cognition, and brain health in aging.

Boa Sorte Silva NC, Barha CK, Erickson KI, Kramer AF, Liu-Ambrose T. Boa Sorte Silva NC, et al. Among authors: kramer af. Trends Neurosci. 2024 May 28:S0166-2236(24)00062-6. doi: 10.1016/j.tins.2024.04.004. Online ahead of print. Trends Neurosci. 2024. PMID: 38811309 Review.

10

Testing the structural disconnection hypothesis: Myelin content correlates with memory in healthy aging.

Mendez Colmenares A, Thomas ML, Anderson C, Arciniegas DB, Calhoun V, Choi IY, Kramer AF, Li K, Lee J, Lee P, Burzynska AZ. Mendez Colmenares A, et al. Among authors: kramer af. Neurobiol Aging. 2024 May 23;141:21-33. doi: 10.1016/j.neurobiolaging.2024.05.013. Online ahead of print. Neurobiol Aging. 2024. PMID: 38810596

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