Baù D - Search Results

1

Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae.

Trussart M, Yus E, Martinez S, Baù D, Tahara YO, Pengo T, Widjaja M, Kretschmer S, Swoger J, Djordjevic S, Turnbull L, Whitchurch C, Miyata M, Marti-Renom MA, Lluch-Senar M, Serrano L. Trussart M, et al. Among authors: bau d. Nat Commun. 2017 Mar 8;8:14665. doi: 10.1038/ncomms14665. Nat Commun. 2017. PMID: 28272414 Free PMC article.

2

The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules.

Baù D, Sanyal A, Lajoie BR, Capriotti E, Byron M, Lawrence JB, Dekker J, Marti-Renom MA. Baù D, et al. Nat Struct Mol Biol. 2011 Jan;18(1):107-14. doi: 10.1038/nsmb.1936. Epub 2010 Dec 5. Nat Struct Mol Biol. 2011. PMID: 21131981 Free PMC article.

3

Structure determination of genomic domains by satisfaction of spatial restraints.

Baù D, Marti-Renom MA. Baù D, et al. Chromosome Res. 2011 Jan;19(1):25-35. doi: 10.1007/s10577-010-9167-2. Chromosome Res. 2011. PMID: 21190133 Review.

4

Chromatin globules: a common motif of higher order chromosome structure?

Sanyal A, Baù D, Martí-Renom MA, Dekker J. Sanyal A, et al. Among authors: bau d. Curr Opin Cell Biol. 2011 Jun;23(3):325-31. doi: 10.1016/j.ceb.2011.03.009. Epub 2011 Apr 12. Curr Opin Cell Biol. 2011. PMID: 21489772 Free PMC article. Review.

5

Impact of Fgd1 and ddn diversity in Mycobacterium tuberculosis complex on in vitro susceptibility to PA-824.

Feuerriegel S, Köser CU, Baù D, Rüsch-Gerdes S, Summers DK, Archer JA, Marti-Renom MA, Niemann S. Feuerriegel S, et al. Among authors: bau d. Antimicrob Agents Chemother. 2011 Dec;55(12):5718-22. doi: 10.1128/AAC.05500-11. Epub 2011 Sep 19. Antimicrob Agents Chemother. 2011. PMID: 21930879 Free PMC article.

6

The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation.

Umbarger MA, Toro E, Wright MA, Porreca GJ, Baù D, Hong SH, Fero MJ, Zhu LJ, Marti-Renom MA, McAdams HH, Shapiro L, Dekker J, Church GM. Umbarger MA, et al. Among authors: bau d. Mol Cell. 2011 Oct 21;44(2):252-64. doi: 10.1016/j.molcel.2011.09.010. Mol Cell. 2011. PMID: 22017872 Free PMC article.

7

Genome structure determination via 3C-based data integration by the Integrative Modeling Platform.

Baù D, Marti-Renom MA. Baù D, et al. Methods. 2012 Nov;58(3):300-6. doi: 10.1016/j.ymeth.2012.04.004. Epub 2012 Apr 13. Methods. 2012. PMID: 22522224 Review.

8

Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation.

Le Dily F, Baù D, Pohl A, Vicent GP, Serra F, Soronellas D, Castellano G, Wright RH, Ballare C, Filion G, Marti-Renom MA, Beato M. Le Dily F, et al. Among authors: bau d. Genes Dev. 2014 Oct 1;28(19):2151-62. doi: 10.1101/gad.241422.114. Genes Dev. 2014. PMID: 25274727 Free PMC article.

9

Assessing the limits of restraint-based 3D modeling of genomes and genomic domains.

Trussart M, Serra F, Baù D, Junier I, Serrano L, Marti-Renom MA. Trussart M, et al. Among authors: bau d. Nucleic Acids Res. 2015 Apr 20;43(7):3465-77. doi: 10.1093/nar/gkv221. Epub 2015 Mar 23. Nucleic Acids Res. 2015. PMID: 25800747 Free PMC article.

10

Restraint-based three-dimensional modeling of genomes and genomic domains.

Serra F, Di Stefano M, Spill YG, Cuartero Y, Goodstadt M, Baù D, Marti-Renom MA. Serra F, et al. Among authors: bau d. FEBS Lett. 2015 Oct 7;589(20 Pt A):2987-95. doi: 10.1016/j.febslet.2015.05.012. Epub 2015 May 14. FEBS Lett. 2015. PMID: 25980604 Free article. Review.

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