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Design and characterization of a 52K SNP chip for goats.
Tosser-Klopp G, Bardou P, Bouchez O, Cabau C, Crooijmans R, Dong Y, Donnadieu-Tonon C, Eggen A, Heuven HC, Jamli S, Jiken AJ, Klopp C, Lawley CT, McEwan J, Martin P, Moreno CR, Mulsant P, Nabihoudine I, Pailhoux E, Palhière I, Rupp R, Sarry J, Sayre BL, Tircazes A, Jun Wang, Wang W, Zhang W; International Goat Genome Consortium. Tosser-Klopp G, et al. PLoS One. 2014 Jan 22;9(1):e86227. doi: 10.1371/journal.pone.0086227. eCollection 2014. PLoS One. 2014. PMID: 24465974 Free PMC article.
The sheep genome illuminates biology of the rumen and lipid metabolism.
Jiang Y, Xie M, Chen W, Talbot R, Maddox JF, Faraut T, Wu C, Muzny DM, Li Y, Zhang W, Stanton JA, Brauning R, Barris WC, Hourlier T, Aken BL, Searle SMJ, Adelson DL, Bian C, Cam GR, Chen Y, Cheng S, DeSilva U, Dixen K, Dong Y, Fan G, Franklin IR, Fu S, Guan R, Highland MA, Holder ME, Huang G, Ingham AB, Jhangiani SN, Kalra D, Kovar CL, Lee SL, Liu W, Liu X, Lu C, Lv T, Mathew T, McWilliam S, Menzies M, Pan S, Robelin D, Servin B, Townley D, Wang W, Wei B, White SN, Yang X, Ye C, Yue Y, Zeng P, Zhou Q, Hansen JB, Kristensen K, Gibbs RA, Flicek P, Warkup CC, Jones HE, Oddy VH, Nicholas FW, McEwan JC, Kijas J, Wang J, Worley KC, Archibald AL, Cockett N, Xu X, Wang W, Dalrymple BP. Jiang Y, et al. Among authors: liu x, liu w. Science. 2014 Jun 6;344(6188):1168-1173. doi: 10.1126/science.1252806. Science. 2014. PMID: 24904168 Free PMC article.
Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes.
You X, Bian C, Zan Q, Xu X, Liu X, Chen J, Wang J, Qiu Y, Li W, Zhang X, Sun Y, Chen S, Hong W, Li Y, Cheng S, Fan G, Shi C, Liang J, Tom Tang Y, Yang C, Ruan Z, Bai J, Peng C, Mu Q, Lu J, Fan M, Yang S, Huang Z, Jiang X, Fang X, Zhang G, Zhang Y, Polgar G, Yu H, Li J, Liu Z, Zhang G, Ravi V, Coon SL, Wang J, Yang H, Venkatesh B, Wang J, Shi Q. You X, et al. Among authors: liu z, liu x. Nat Commun. 2014 Dec 2;5:5594. doi: 10.1038/ncomms6594. Nat Commun. 2014. PMID: 25463417 Free PMC article.
A genome draft of the legless anguid lizard, Ophisaurus gracilis.
Song B, Cheng S, Sun Y, Zhong X, Jin J, Guan R, Murphy RW, Che J, Zhang Y, Liu X. Song B, et al. Among authors: liu x. Gigascience. 2015 Apr 9;4:17. doi: 10.1186/s13742-015-0056-7. eCollection 2015. Gigascience. 2015. PMID: 25859342 Free PMC article.
The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis.
Lin S, Cheng S, Song B, Zhong X, Lin X, Li W, Li L, Zhang Y, Zhang H, Ji Z, Cai M, Zhuang Y, Shi X, Lin L, Wang L, Wang Z, Liu X, Yu S, Zeng P, Hao H, Zou Q, Chen C, Li Y, Wang Y, Xu C, Meng S, Xu X, Wang J, Yang H, Campbell DA, Sturm NR, Dagenais-Bellefeuille S, Morse D. Lin S, et al. Among authors: liu x. Science. 2015 Nov 6;350(6261):691-4. doi: 10.1126/science.aad0408. Science. 2015. PMID: 26542574 Free article.
Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify.
Dijkhuizen LW, Brouwer P, Bolhuis H, Reichart GJ, Koppers N, Huettel B, Bolger AM, Li FW, Cheng S, Liu X, Wong GK, Pryer K, Weber A, Bräutigam A, Schluepmann H. Dijkhuizen LW, et al. Among authors: liu x. New Phytol. 2018 Jan;217(1):453-466. doi: 10.1111/nph.14843. Epub 2017 Oct 30. New Phytol. 2018. PMID: 29084347 Free PMC article.
10KP: A phylodiverse genome sequencing plan.
Cheng S, Melkonian M, Smith SA, Brockington S, Archibald JM, Delaux PM, Li FW, Melkonian B, Mavrodiev EV, Sun W, Fu Y, Yang H, Soltis DE, Graham SW, Soltis PS, Liu X, Xu X, Wong GK. Cheng S, et al. Among authors: liu x. Gigascience. 2018 Mar 1;7(3):1-9. doi: 10.1093/gigascience/giy013. Gigascience. 2018. PMID: 29618049 Free PMC article.
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis.
Griesmann M, Chang Y, Liu X, Song Y, Haberer G, Crook MB, Billault-Penneteau B, Lauressergues D, Keller J, Imanishi L, Roswanjaya YP, Kohlen W, Pujic P, Battenberg K, Alloisio N, Liang Y, Hilhorst H, Salgado MG, Hocher V, Gherbi H, Svistoonoff S, Doyle JJ, He S, Xu Y, Xu S, Qu J, Gao Q, Fang X, Fu Y, Normand P, Berry AM, Wall LG, Ané JM, Pawlowski K, Xu X, Yang H, Spannagl M, Mayer KFX, Wong GK, Parniske M, Delaux PM, Cheng S. Griesmann M, et al. Among authors: liu x. Science. 2018 Jul 13;361(6398):eaat1743. doi: 10.1126/science.aat1743. Epub 2018 May 24. Science. 2018. PMID: 29794220
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