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A novel RNA sequencing data analysis method for cell line authentication.
Fasterius E, Raso C, Kennedy S, Rauch N, Lundin P, Kolch W, Uhlén M, Al-Khalili Szigyarto C. Fasterius E, et al. Among authors: lundin p. PLoS One. 2017 Feb 13;12(2):e0171435. doi: 10.1371/journal.pone.0171435. eCollection 2017. PLoS One. 2017. PMID: 28192450 Free PMC article.
Whole genome DNA sequencing provides an atlas of somatic mutagenesis in healthy human cells and identifies a tumor-prone cell type.
Franco I, Helgadottir HT, Moggio A, Larsson M, Vrtačnik P, Johansson A, Norgren N, Lundin P, Mas-Ponte D, Nordström J, Lundgren T, Stenvinkel P, Wennberg L, Supek F, Eriksson M. Franco I, et al. Among authors: lundin p. Genome Biol. 2019 Dec 18;20(1):285. doi: 10.1186/s13059-019-1892-z. Genome Biol. 2019. PMID: 31849330 Free PMC article.
SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population.
Ameur A, Dahlberg J, Olason P, Vezzi F, Karlsson R, Martin M, Viklund J, Kähäri AK, Lundin P, Che H, Thutkawkorapin J, Eisfeldt J, Lampa S, Dahlberg M, Hagberg J, Jareborg N, Liljedahl U, Jonasson I, Johansson Å, Feuk L, Lundeberg J, Syvänen AC, Lundin S, Nilsson D, Nystedt B, Magnusson PK, Gyllensten U. Ameur A, et al. Among authors: lundin s, lundin p. Eur J Hum Genet. 2017 Nov;25(11):1253-1260. doi: 10.1038/ejhg.2017.130. Epub 2017 Aug 23. Eur J Hum Genet. 2017. PMID: 28832569 Free PMC article.
Somatic mutagenesis in satellite cells associates with human skeletal muscle aging.
Franco I, Johansson A, Olsson K, Vrtačnik P, Lundin P, Helgadottir HT, Larsson M, Revêchon G, Bosia C, Pagnani A, Provero P, Gustafsson T, Fischer H, Eriksson M. Franco I, et al. Among authors: lundin p. Nat Commun. 2018 Feb 23;9(1):800. doi: 10.1038/s41467-018-03244-6. Nat Commun. 2018. PMID: 29476074 Free PMC article.
Mutations in BRIP1 confer high risk of ovarian cancer.
Rafnar T, Gudbjartsson DF, Sulem P, Jonasdottir A, Sigurdsson A, Jonasdottir A, Besenbacher S, Lundin P, Stacey SN, Gudmundsson J, Magnusson OT, le Roux L, Orlygsdottir G, Helgadottir HT, Johannsdottir H, Gylfason A, Tryggvadottir L, Jonasson JG, de Juan A, Ortega E, Ramon-Cajal JM, García-Prats MD, Mayordomo C, Panadero A, Rivera F, Aben KK, van Altena AM, Massuger LF, Aavikko M, Kujala PM, Staff S, Aaltonen LA, Olafsdottir K, Bjornsson J, Kong A, Salvarsdottir A, Saemundsson H, Olafsson K, Benediktsdottir KR, Gulcher J, Masson G, Kiemeney LA, Mayordomo JI, Thorsteinsdottir U, Stefansson K. Rafnar T, et al. Among authors: lundin p. Nat Genet. 2011 Oct 2;43(11):1104-7. doi: 10.1038/ng.955. Nat Genet. 2011. PMID: 21964575
Novel patterns of genome rearrangement and their association with survival in breast cancer.
Hicks J, Krasnitz A, Lakshmi B, Navin NE, Riggs M, Leibu E, Esposito D, Alexander J, Troge J, Grubor V, Yoon S, Wigler M, Ye K, Børresen-Dale AL, Naume B, Schlicting E, Norton L, Hägerström T, Skoog L, Auer G, Månér S, Lundin P, Zetterberg A. Hicks J, et al. Among authors: lundin p. Genome Res. 2006 Dec;16(12):1465-79. doi: 10.1101/gr.5460106. Genome Res. 2006. PMID: 17142309 Free PMC article.
High-resolution ROMA CGH and FISH analysis of aneuploid and diploid breast tumors.
Hicks J, Muthuswamy L, Krasnitz A, Navin N, Riggs M, Grubor V, Esposito D, Alexander J, Troge J, Wigler M, Maner S, Lundin P, Zetterberg A. Hicks J, et al. Among authors: lundin p. Cold Spring Harb Symp Quant Biol. 2005;70:51-63. doi: 10.1101/sqb.2005.70.055. Cold Spring Harb Symp Quant Biol. 2005. PMID: 16869738
PROBER: oligonucleotide FISH probe design software.
Navin N, Grubor V, Hicks J, Leibu E, Thomas E, Troge J, Riggs M, Lundin P, Månér S, Sebat J, Zetterberg A, Wigler M. Navin N, et al. Among authors: lundin p. Bioinformatics. 2006 Oct 1;22(19):2437-8. doi: 10.1093/bioinformatics/btl273. Epub 2006 Jun 1. Bioinformatics. 2006. PMID: 16740623 Free article.
Inferring tumor progression from genomic heterogeneity.
Navin N, Krasnitz A, Rodgers L, Cook K, Meth J, Kendall J, Riggs M, Eberling Y, Troge J, Grubor V, Levy D, Lundin P, Månér S, Zetterberg A, Hicks J, Wigler M. Navin N, et al. Among authors: lundin p. Genome Res. 2010 Jan;20(1):68-80. doi: 10.1101/gr.099622.109. Epub 2009 Nov 10. Genome Res. 2010. PMID: 19903760 Free PMC article.
178 results