De Las Rivas J - Search Results

1

Linking amyotrophic lateral sclerosis and spinal muscular atrophy through RNA-transcriptome homeostasis: a genomics perspective.

Gama-Carvalho M, L Garcia-Vaquero M, R Pinto F, Besse F, Weis J, Voigt A, Schulz JB, De Las Rivas J. Gama-Carvalho M, et al. Among authors: de las rivas j. J Neurochem. 2017 Apr;141(1):12-30. doi: 10.1111/jnc.13945. Epub 2017 Feb 28. J Neurochem. 2017. PMID: 28054357 Free article. Review.

2

RasGRF1 disruption causes retinal photoreception defects and associated transcriptomic alterations.

Fernández-Medarde A, Barhoum R, Riquelme R, Porteros A, Núñez A, de Luis A, de Las Rivas J, de la Villa P, Varela-Nieto I, Santos E. Fernández-Medarde A, et al. Among authors: de las rivas j, de luis a, de la villa p. J Neurochem. 2009 Jul;110(2):641-52. doi: 10.1111/j.1471-4159.2009.06162.x. Epub 2009 May 11. J Neurochem. 2009. PMID: 19457086 Free article.

3

Biological interacting units identified in human protein networks reveal tissue-functional diversification and its impact on disease.

García-Vaquero ML, Gama-Carvalho M, Pinto FR, De Las Rivas J. García-Vaquero ML, et al. Among authors: de las rivas j. Comput Struct Biotechnol J. 2022 Jul 15;20:3764-3778. doi: 10.1016/j.csbj.2022.07.006. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35891788 Free PMC article.

4

Combined analysis of genome-wide expression and copy number profiles to identify key altered genomic regions in cancer.

Fontanillo C, Aibar S, Sanchez-Santos JM, De Las Rivas J. Fontanillo C, et al. Among authors: de las rivas j. BMC Genomics. 2012;13 Suppl 5(Suppl 5):S5. doi: 10.1186/1471-2164-13-S5-S5. Epub 2012 Oct 19. BMC Genomics. 2012. PMID: 23095915 Free PMC article.

5

Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.

Prieto C, Risueño A, Fontanillo C, De las Rivas J. Prieto C, et al. Among authors: de las rivas j. PLoS One. 2008;3(12):e3911. doi: 10.1371/journal.pone.0003911. Epub 2008 Dec 15. PLoS One. 2008. PMID: 19081792 Free PMC article.

6

GATExplorer: genomic and transcriptomic explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs.

Risueño A, Fontanillo C, Dinger ME, De Las Rivas J. Risueño A, et al. Among authors: de las rivas j. BMC Bioinformatics. 2010 Apr 29;11:221. doi: 10.1186/1471-2105-11-221. BMC Bioinformatics. 2010. PMID: 20429936 Free PMC article.

7

APID database: redefining protein-protein interaction experimental evidences and binary interactomes.

Alonso-López D, Campos-Laborie FJ, Gutiérrez MA, Lambourne L, Calderwood MA, Vidal M, De Las Rivas J. Alonso-López D, et al. Among authors: de las rivas j. Database (Oxford). 2019 Jan 1;2019:baz005. doi: 10.1093/database/baz005. Database (Oxford). 2019. PMID: 30715274 Free PMC article.

8

DECO: decompose heterogeneous population cohorts for patient stratification and discovery of sample biomarkers using omic data profiling.

Campos-Laborie FJ, Risueño A, Ortiz-Estévez M, Rosón-Burgo B, Droste C, Fontanillo C, Loos R, Sánchez-Santos JM, Trotter MW, De Las Rivas J. Campos-Laborie FJ, et al. Among authors: de las rivas j. Bioinformatics. 2019 Oct 1;35(19):3651-3662. doi: 10.1093/bioinformatics/btz148. Bioinformatics. 2019. PMID: 30824909 Free PMC article.

9

Systematic comparison and assessment of RNA-seq procedures for gene expression quantitative analysis.

Corchete LA, Rojas EA, Alonso-López D, De Las Rivas J, Gutiérrez NC, Burguillo FJ. Corchete LA, et al. Among authors: de las rivas j. Sci Rep. 2020 Nov 12;10(1):19737. doi: 10.1038/s41598-020-76881-x. Sci Rep. 2020. PMID: 33184454 Free PMC article.

10

Comparative Analysis of Cell Mixtures Deconvolution and Gene Signatures Generated for Blood, Immune and Cancer Cells.

Alonso-Moreda N, Berral-González A, De La Rosa E, González-Velasco O, Sánchez-Santos JM, De Las Rivas J. Alonso-Moreda N, et al. Among authors: de las rivas j. Int J Mol Sci. 2023 Jun 28;24(13):10765. doi: 10.3390/ijms241310765. Int J Mol Sci. 2023. PMID: 37445946 Free PMC article.

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