Shechner DM - Search Results

1

Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs.

Melé M, Mattioli K, Mallard W, Shechner DM, Gerhardinger C, Rinn JL. Melé M, et al. Among authors: shechner dm. Genome Res. 2017 Jan;27(1):27-37. doi: 10.1101/gr.214205.116. Epub 2016 Dec 7. Genome Res. 2017. PMID: 27927715 Free PMC article.

2

Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking.

Kaewsapsak P, Shechner DM, Mallard W, Rinn JL, Ting AY. Kaewsapsak P, et al. Among authors: shechner dm. Elife. 2017 Dec 14;6:e29224. doi: 10.7554/eLife.29224. Elife. 2017. PMID: 29239719 Free PMC article.

3

Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display.

Shechner DM, Hacisuleyman E, Younger ST, Rinn JL. Shechner DM, et al. Nat Methods. 2015 Jul;12(7):664-70. doi: 10.1038/nmeth.3433. Epub 2015 Jun 1. Nat Methods. 2015. PMID: 26030444 Free PMC article.

4

High-throughput identification of RNA nuclear enrichment sequences.

Shukla CJ, McCorkindale AL, Gerhardinger C, Korthauer KD, Cabili MN, Shechner DM, Irizarry RA, Maass PG, Rinn JL. Shukla CJ, et al. Among authors: shechner dm. EMBO J. 2018 Mar 15;37(6):e98452. doi: 10.15252/embj.201798452. Epub 2018 Jan 15. EMBO J. 2018. PMID: 29335281 Free PMC article.

5

Spatiotemporal allele organization by allele-specific CRISPR live-cell imaging (SNP-CLING).

Maass PG, Barutcu AR, Shechner DM, Weiner CL, Melé M, Rinn JL. Maass PG, et al. Among authors: shechner dm. Nat Struct Mol Biol. 2018 Feb;25(2):176-184. doi: 10.1038/s41594-017-0015-3. Epub 2018 Jan 8. Nat Struct Mol Biol. 2018. PMID: 29343869 Free PMC article.

6

A class I ligase ribozyme with reduced Mg2+ dependence: Selection, sequence analysis, and identification of functional tertiary interactions.

Bagby SC, Bergman NH, Shechner DM, Yen C, Bartel DP. Bagby SC, et al. Among authors: shechner dm. RNA. 2009 Dec;15(12):2129-46. doi: 10.1261/rna.1912509. RNA. 2009. PMID: 19946040 Free PMC article.

7

Directed Evolution of Split APEX2 Peroxidase.

Han Y, Branon TC, Martell JD, Boassa D, Shechner D, Ellisman MH, Ting A. Han Y, et al. ACS Chem Biol. 2019 Apr 19;14(4):619-635. doi: 10.1021/acschembio.8b00919. Epub 2019 Mar 8. ACS Chem Biol. 2019. PMID: 30848125 Free PMC article.

8

Correction to Directed Evolution of Split APEX2 Peroxidase.

Han Y, Branon TC, Martell JD, Boassa D, Shechner D, Ellisman MH, Ting A. Han Y, et al. ACS Chem Biol. 2019 Dec 20;14(12):2942. doi: 10.1021/acschembio.9b00798. Epub 2019 Oct 28. ACS Chem Biol. 2019. PMID: 31657543 Free article. No abstract available.

9

Targeting Noncoding RNA Domains to Genomic Loci with CRISPR-Display: Guidelines for Designing, Building, and Testing sgRNA-ncRNA Expression Constructs.

Shechner DM. Shechner DM. Methods Mol Biol. 2021;2162:115-152. doi: 10.1007/978-1-0716-0687-2_8. Methods Mol Biol. 2021. PMID: 32926381

10

The structural basis of RNA-catalyzed RNA polymerization.

Shechner DM, Bartel DP. Shechner DM, et al. Nat Struct Mol Biol. 2011 Aug 21;18(9):1036-42. doi: 10.1038/nsmb.2107. Nat Struct Mol Biol. 2011. PMID: 21857665 Free PMC article.

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