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The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut.
Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, Abernathy B, Chu Y, Niederhuth CE, Umale P, Araújo AC, Kozik A, Kim KD, Burow MD, Varshney RK, Wang X, Zhang X, Barkley N, Guimarães PM, Isobe S, Guo B, Liao B, Stalker HT, Schmitz RJ, Scheffler BE, Leal-Bertioli SC, Xun X, Jackson SA, Michelmore R, Ozias-Akins P. Bertioli DJ, et al. Among authors: scheffler be. Nat Genet. 2016 Apr;48(4):438-46. doi: 10.1038/ng.3517. Epub 2016 Feb 22. Nat Genet. 2016. PMID: 26901068 Free article.
The genome sequence of segmental allotetraploid peanut Arachis hypogaea.
Bertioli DJ, Jenkins J, Clevenger J, Dudchenko O, Gao D, Seijo G, Leal-Bertioli SCM, Ren L, Farmer AD, Pandey MK, Samoluk SS, Abernathy B, Agarwal G, Ballén-Taborda C, Cameron C, Campbell J, Chavarro C, Chitikineni A, Chu Y, Dash S, El Baidouri M, Guo B, Huang W, Kim KD, Korani W, Lanciano S, Lui CG, Mirouze M, Moretzsohn MC, Pham M, Shin JH, Shirasawa K, Sinharoy S, Sreedasyam A, Weeks NT, Zhang X, Zheng Z, Sun Z, Froenicke L, Aiden EL, Michelmore R, Varshney RK, Holbrook CC, Cannon EKS, Scheffler BE, Grimwood J, Ozias-Akins P, Cannon SB, Jackson SA, Schmutz J. Bertioli DJ, et al. Among authors: scheffler be. Nat Genet. 2019 May;51(5):877-884. doi: 10.1038/s41588-019-0405-z. Epub 2019 May 1. Nat Genet. 2019. PMID: 31043755
Two New Aspergillus flavus Reference Genomes Reveal a Large Insertion Potentially Contributing to Isolate Stress Tolerance and Aflatoxin Production.
Fountain JC, Clevenger JP, Nadon B, Youngblood RC, Korani W, Chang PK, Starr D, Wang H, Isett B, Johnston HR, Wiggins R, Agarwal G, Chu Y, Kemerait RC, Pandey MK, Bhatnagar D, Ozias-Akins P, Varshney RK, Scheffler BE, Vaughn JN, Guo B. Fountain JC, et al. Among authors: scheffler be. G3 (Bethesda). 2020 Oct 5;10(10):3515-3531. doi: 10.1534/g3.120.401405. G3 (Bethesda). 2020. PMID: 32817124 Free PMC article.
Legacy genetics of Arachis cardenasii in the peanut crop shows the profound benefits of international seed exchange.
Bertioli DJ, Clevenger J, Godoy IJ, Stalker HT, Wood S, Santos JF, Ballén-Taborda C, Abernathy B, Azevedo V, Campbell J, Chavarro C, Chu Y, Farmer AD, Fonceka D, Gao D, Grimwood J, Halpin N, Korani W, Michelotto MD, Ozias-Akins P, Vaughn J, Youngblood R, Moretzsohn MC, Wright GC, Jackson SA, Cannon SB, Scheffler BE, Leal-Bertioli SCM. Bertioli DJ, et al. Among authors: scheffler be. Proc Natl Acad Sci U S A. 2021 Sep 21;118(38):e2104899118. doi: 10.1073/pnas.2104899118. Proc Natl Acad Sci U S A. 2021. PMID: 34518223 Free PMC article.
Microscopic and Transcriptomic Analyses of Dalbergoid Legume Peanut Reveal a Divergent Evolution Leading to Nod-Factor-Dependent Epidermal Crack-Entry and Terminal Bacteroid Differentiation.
Raul B, Bhattacharjee O, Ghosh A, Upadhyay P, Tembhare K, Singh A, Shaheen T, Ghosh AK, Torres-Jerez I, Krom N, Clevenger J, Udvardi M, Scheffler BE, Ozias-Akins P, Sharma RD, Bandyopadhyay K, Gaur V, Kumar S, Sinharoy S. Raul B, et al. Among authors: scheffler be. Mol Plant Microbe Interact. 2022 Feb;35(2):131-145. doi: 10.1094/MPMI-05-21-0122-R. Epub 2022 Jan 31. Mol Plant Microbe Interact. 2022. PMID: 34689599 Free article.
Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement.
Zhang T, Hu Y, Jiang W, Fang L, Guan X, Chen J, Zhang J, Saski CA, Scheffler BE, Stelly DM, Hulse-Kemp AM, Wan Q, Liu B, Liu C, Wang S, Pan M, Wang Y, Wang D, Ye W, Chang L, Zhang W, Song Q, Kirkbride RC, Chen X, Dennis E, Llewellyn DJ, Peterson DG, Thaxton P, Jones DC, Wang Q, Xu X, Zhang H, Wu H, Zhou L, Mei G, Chen S, Tian Y, Xiang D, Li X, Ding J, Zuo Q, Tao L, Liu Y, Li J, Lin Y, Hui Y, Cao Z, Cai C, Zhu X, Jiang Z, Zhou B, Guo W, Li R, Chen ZJ. Zhang T, et al. Among authors: scheffler be. Nat Biotechnol. 2015 May;33(5):531-7. doi: 10.1038/nbt.3207. Epub 2015 Apr 20. Nat Biotechnol. 2015. PMID: 25893781
Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade assemblies of polyploids.
Saski CA, Scheffler BE, Hulse-Kemp AM, Liu B, Song Q, Ando A, Stelly DM, Scheffler JA, Grimwood J, Jones DC, Peterson DG, Schmutz J, Chen ZJ. Saski CA, et al. Among authors: scheffler be, scheffler ja. Sci Rep. 2017 Nov 10;7(1):15274. doi: 10.1038/s41598-017-14885-w. Sci Rep. 2017. PMID: 29127298 Free PMC article.
276 results