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RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data.
Movassagh M, Alomran N, Mudvari P, Dede M, Dede C, Kowsari K, Restrepo P, Cauley E, Bahl S, Li M, Waterhouse W, Tsaneva-Atanasova K, Edwards N, Horvath A. Movassagh M, et al. Among authors: mudvari p. Nucleic Acids Res. 2016 Dec 15;44(22):e161. doi: 10.1093/nar/gkw757. Epub 2016 Aug 30. Nucleic Acids Res. 2016. PMID: 27576531 Free PMC article.
SNPlice: variants that modulate Intron retention from RNA-sequencing data.
Mudvari P, Movassagh M, Kowsari K, Seyfi A, Kokkinaki M, Edwards NJ, Golestaneh N, Horvath A. Mudvari P, et al. Bioinformatics. 2015 Apr 15;31(8):1191-8. doi: 10.1093/bioinformatics/btu804. Epub 2014 Dec 6. Bioinformatics. 2015. PMID: 25481010 Free PMC article.
Co-Occurrence of COMT and BRCA1/2 Variants in a Population.
Movassagh M, Mudvari P, Horvath A. Movassagh M, et al. Among authors: mudvari p. N Engl J Med. 2017 May 25;376(21):2090-2091. doi: 10.1056/NEJMc1701592. N Engl J Med. 2017. PMID: 28538113 No abstract available.
Novel insights into breast cancer genetic variance through RNA sequencing.
Horvath A, Pakala SB, Mudvari P, Reddy SD, Ohshiro K, Casimiro S, Pires R, Fuqua SA, Toi M, Costa L, Nair SS, Sukumar S, Kumar R. Horvath A, et al. Among authors: mudvari p. Sci Rep. 2013;3:2256. doi: 10.1038/srep02256. Sci Rep. 2013. PMID: 23884293 Free PMC article.
RNA sequencing of cancer reveals novel splicing alterations.
Eswaran J, Horvath A, Godbole S, Reddy SD, Mudvari P, Ohshiro K, Cyanam D, Nair S, Fuqua SA, Polyak K, Florea LD, Kumar R. Eswaran J, et al. Among authors: mudvari p. Sci Rep. 2013;3:1689. doi: 10.1038/srep01689. Sci Rep. 2013. PMID: 23604310 Free PMC article.
Transcriptomic landscape of breast cancers through mRNA sequencing.
Eswaran J, Cyanam D, Mudvari P, Reddy SD, Pakala SB, Nair SS, Florea L, Fuqua SA, Godbole S, Kumar R. Eswaran J, et al. Among authors: mudvari p. Sci Rep. 2012;2:264. doi: 10.1038/srep00264. Epub 2012 Feb 14. Sci Rep. 2012. PMID: 22355776 Free PMC article.
MTA1 promotes STAT3 transcription and pulmonary metastasis in breast cancer.
Pakala SB, Rayala SK, Wang RA, Ohshiro K, Mudvari P, Reddy SD, Zheng Y, Pires R, Casimiro S, Pillai MR, Costa L, Kumar R. Pakala SB, et al. Among authors: mudvari p. Cancer Res. 2013 Jun 15;73(12):3761-70. doi: 10.1158/0008-5472.CAN-12-3998. Epub 2013 Apr 11. Cancer Res. 2013. PMID: 23580571 Free PMC article.
29 results