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RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data.
Movassagh M, Alomran N, Mudvari P, Dede M, Dede C, Kowsari K, Restrepo P, Cauley E, Bahl S, Li M, Waterhouse W, Tsaneva-Atanasova K, Edwards N, Horvath A. Movassagh M, et al. Among authors: kowsari k. Nucleic Acids Res. 2016 Dec 15;44(22):e161. doi: 10.1093/nar/gkw757. Epub 2016 Aug 30. Nucleic Acids Res. 2016. PMID: 27576531 Free PMC article.
SNPlice: variants that modulate Intron retention from RNA-sequencing data.
Mudvari P, Movassagh M, Kowsari K, Seyfi A, Kokkinaki M, Edwards NJ, Golestaneh N, Horvath A. Mudvari P, et al. Among authors: kowsari k. Bioinformatics. 2015 Apr 15;31(8):1191-8. doi: 10.1093/bioinformatics/btu804. Epub 2014 Dec 6. Bioinformatics. 2015. PMID: 25481010 Free PMC article.
23 results