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Contrasting origin of B chromosomes in two cervids (Siberian roe deer and grey brocket deer) unravelled by chromosome-specific DNA sequencing.
Makunin AI, Kichigin IG, Larkin DM, O'Brien PC, Ferguson-Smith MA, Yang F, Proskuryakova AA, Vorobieva NV, Chernyaeva EN, O'Brien SJ, Graphodatsky AS, Trifonov VA. Makunin AI, et al. Among authors: larkin dm. BMC Genomics. 2016 Aug 11;17(1):618. doi: 10.1186/s12864-016-2933-6. BMC Genomics. 2016. PMID: 27516089 Free PMC article.
Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps.
Murphy WJ, Larkin DM, Everts-van der Wind A, Bourque G, Tesler G, Auvil L, Beever JE, Chowdhary BP, Galibert F, Gatzke L, Hitte C, Meyers SN, Milan D, Ostrander EA, Pape G, Parker HG, Raudsepp T, Rogatcheva MB, Schook LB, Skow LC, Welge M, Womack JE, O'brien SJ, Pevzner PA, Lewin HA. Murphy WJ, et al. Among authors: larkin dm. Science. 2005 Jul 22;309(5734):613-7. doi: 10.1126/science.1111387. Science. 2005. PMID: 16040707
Every genome sequence needs a good map.
Lewin HA, Larkin DM, Pontius J, O'Brien SJ. Lewin HA, et al. Among authors: larkin dm. Genome Res. 2009 Nov;19(11):1925-8. doi: 10.1101/gr.094557.109. Epub 2009 Jul 13. Genome Res. 2009. PMID: 19596977 Free PMC article. No abstract available.
Comparative genomics reveals insights into avian genome evolution and adaptation.
Zhang G, Li C, Li Q, Li B, Larkin DM, Lee C, Storz JF, Antunes A, Greenwold MJ, Meredith RW, Ödeen A, Cui J, Zhou Q, Xu L, Pan H, Wang Z, Jin L, Zhang P, Hu H, Yang W, Hu J, Xiao J, Yang Z, Liu Y, Xie Q, Yu H, Lian J, Wen P, Zhang F, Li H, Zeng Y, Xiong Z, Liu S, Zhou L, Huang Z, An N, Wang J, Zheng Q, Xiong Y, Wang G, Wang B, Wang J, Fan Y, da Fonseca RR, Alfaro-Núñez A, Schubert M, Orlando L, Mourier T, Howard JT, Ganapathy G, Pfenning A, Whitney O, Rivas MV, Hara E, Smith J, Farré M, Narayan J, Slavov G, Romanov MN, Borges R, Machado JP, Khan I, Springer MS, Gatesy J, Hoffmann FG, Opazo JC, Håstad O, Sawyer RH, Kim H, Kim KW, Kim HJ, Cho S, Li N, Huang Y, Bruford MW, Zhan X, Dixon A, Bertelsen MF, Derryberry E, Warren W, Wilson RK, Li S, Ray DA, Green RE, O'Brien SJ, Griffin D, Johnson WE, Haussler D, Ryder OA, Willerslev E, Graves GR, Alström P, Fjeldså J, Mindell DP, Edwards SV, Braun EL, Rahbek C, Burt DW, Houde P, Zhang Y, Yang H, Wang J; Avian Genome Consortium; Jarvis ED, Gilbert MT, Wang J. Zhang G, et al. Among authors: larkin dm. Science. 2014 Dec 12;346(6215):1311-20. doi: 10.1126/science.1251385. Epub 2014 Dec 11. Science. 2014. PMID: 25504712 Free PMC article.
The Genome 10K Project: a way forward.
Koepfli KP, Paten B; Genome 10K Community of Scientists; O'Brien SJ. Koepfli KP, et al. Annu Rev Anim Biosci. 2015;3:57-111. doi: 10.1146/annurev-animal-090414-014900. Annu Rev Anim Biosci. 2015. PMID: 25689317 Free PMC article. Review.
X Chromosome Evolution in Cetartiodactyla.
Proskuryakova AA, Kulemzina AI, Perelman PL, Makunin AI, Larkin DM, Farré M, Kukekova AV, Lynn Johnson J, Lemskaya NA, Beklemisheva VR, Roelke-Parker ME, Bellizzi J, Ryder OA, O'Brien SJ, Graphodatsky AS. Proskuryakova AA, et al. Among authors: larkin dm. Genes (Basel). 2017 Aug 31;8(9):216. doi: 10.3390/genes8090216. Genes (Basel). 2017. PMID: 28858207 Free PMC article.
Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks.
Farré M, Kim J, Proskuryakova AA, Zhang Y, Kulemzina AI, Li Q, Zhou Y, Xiong Y, Johnson JL, Perelman PL, Johnson WE, Warren WC, Kukekova AV, Zhang G, O'Brien SJ, Ryder OA, Graphodatsky AS, Ma J, Lewin HA, Larkin DM. Farré M, et al. Among authors: larkin dm. Genome Res. 2019 Apr;29(4):576-589. doi: 10.1101/gr.239863.118. Epub 2019 Feb 13. Genome Res. 2019. PMID: 30760546 Free PMC article.
103 results