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Gap Filling as Exact Path Length Problem.
Salmela L, Sahlin K, Mäkinen V, Tomescu AI. Salmela L, et al. Among authors: tomescu ai. J Comput Biol. 2016 May;23(5):347-61. doi: 10.1089/cmb.2015.0197. Epub 2016 Mar 9. J Comput Biol. 2016. PMID: 26959081
A safe and complete algorithm for metagenomic assembly.
Obscura Acosta N, Mäkinen V, Tomescu AI. Obscura Acosta N, et al. Among authors: tomescu ai. Algorithms Mol Biol. 2018 Feb 7;13:3. doi: 10.1186/s13015-018-0122-7. eCollection 2018. Algorithms Mol Biol. 2018. PMID: 29445416 Free PMC article.
Hardness of Covering Alignment: Phase Transition in Post-Sequence Genomics.
Rizzi R, Cairo M, Makinen V, Tomescu AI, Valenzuela D. Rizzi R, et al. Among authors: tomescu ai. IEEE/ACM Trans Comput Biol Bioinform. 2019 Jan-Feb;16(1):23-30. doi: 10.1109/TCBB.2018.2831691. Epub 2018 Apr 30. IEEE/ACM Trans Comput Biol Bioinform. 2019. PMID: 29994032
Safely Filling Gaps with Partial Solutions Common to All Solutions.
Salmela L, Tomescu AI. Salmela L, et al. Among authors: tomescu ai. IEEE/ACM Trans Comput Biol Bioinform. 2019 Mar-Apr;16(2):617-626. doi: 10.1109/TCBB.2017.2785831. Epub 2018 Jan 15. IEEE/ACM Trans Comput Biol Bioinform. 2019. PMID: 29994355
29 results