de Vries R - Search Results

1

Compaction of isolated Escherichia coli nucleoids: Polymer and H-NS protein synergetics.

Wegner AS, Wintraecken K, Spurio R, Woldringh CL, de Vries R, Odijk T. Wegner AS, et al. Among authors: de vries r. J Struct Biol. 2016 Apr;194(1):129-37. doi: 10.1016/j.jsb.2016.02.009. Epub 2016 Feb 8. J Struct Biol. 2016. PMID: 26868106

2

Probing the relation between protein-protein interactions and DNA binding for a linker mutant of the bacterial nucleoid protein H-NS.

Giangrossi M, Wintraecken K, Spurio R, de Vries R. Giangrossi M, et al. Among authors: de vries r. Biochim Biophys Acta. 2014 Feb;1844(2):339-45. doi: 10.1016/j.bbapap.2013.11.010. Epub 2013 Nov 23. Biochim Biophys Acta. 2014. PMID: 24275506

3

DNA condensation in bacteria: Interplay between macromolecular crowding and nucleoid proteins.

de Vries R. de Vries R. Biochimie. 2010 Dec;92(12):1715-21. doi: 10.1016/j.biochi.2010.06.024. Epub 2010 Jul 6. Biochimie. 2010. PMID: 20615449 Review.

4

The influence of ligand valency on aggregation mechanisms for inhibiting bacterial toxins.

Sisu C, Baron AJ, Branderhorst HM, Connell SD, Weijers CA, de Vries R, Hayes ED, Pukin AV, Gilbert M, Pieters RJ, Zuilhof H, Visser GM, Turnbull WB. Sisu C, et al. Among authors: de vries r. Chembiochem. 2009 Jan 26;10(2):329-37. doi: 10.1002/cbic.200800550. Chembiochem. 2009. PMID: 19034953

5

Influence of mobile DNA-protein-DNA bridges on DNA configurations: coarse-grained Monte-Carlo simulations.

de Vries R. de Vries R. J Chem Phys. 2011 Sep 28;135(12):125104. doi: 10.1063/1.3636383. J Chem Phys. 2011. PMID: 21974563

6

Liquid crystals of self-assembled DNA bottlebrushes.

Storm IM, Kornreich M, Hernandez-Garcia A, Voets IK, Beck R, Cohen Stuart MA, Leermakers FA, de Vries R. Storm IM, et al. Among authors: de vries r. J Phys Chem B. 2015 Mar 12;119(10):4084-92. doi: 10.1021/jp511412t. Epub 2015 Feb 26. J Phys Chem B. 2015. PMID: 25689450

7

Monitoring Protein Capsid Assembly with a Conjugated Polymer Strain Sensor.

Cingil HE, Storm IM, Yorulmaz Y, te Brake DW, de Vries R, Cohen Stuart MA, Sprakel J. Cingil HE, et al. Among authors: de vries r. J Am Chem Soc. 2015 Aug 12;137(31):9800-3. doi: 10.1021/jacs.5b05914. Epub 2015 Aug 4. J Am Chem Soc. 2015. PMID: 26230158

8

Depletion-induced instability in protein-DNA mixtures: Influence of protein charge and size.

de Vries R. de Vries R. J Chem Phys. 2006 Jul 7;125(1):014905. doi: 10.1063/1.2209683. J Chem Phys. 2006. PMID: 16863331

9

CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3.

Westra ER, van Erp PB, Künne T, Wong SP, Staals RH, Seegers CL, Bollen S, Jore MM, Semenova E, Severinov K, de Vos WM, Dame RT, de Vries R, Brouns SJ, van der Oost J. Westra ER, et al. Among authors: de vries r, de vos wm. Mol Cell. 2012 Jun 8;46(5):595-605. doi: 10.1016/j.molcel.2012.03.018. Epub 2012 Apr 19. Mol Cell. 2012. PMID: 22521689 Free PMC article.

10

Self-Assembly Dynamics of Linear Virus-Like Particles: Theory and Experiment.

Punter MT, Hernandez-Garcia A, Kraft DJ, de Vries R, van der Schoot P. Punter MT, et al. Among authors: de vries r. J Phys Chem B. 2016 Jul 7;120(26):6286-97. doi: 10.1021/acs.jpcb.6b02680. Epub 2016 May 5. J Phys Chem B. 2016. PMID: 27116218

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