Chakravarti A - Search Results

1

Transcriptional regulation of PRPF31 gene expression by MSR1 repeat elements causes incomplete penetrance in retinitis pigmentosa.

Rose AM, Shah AZ, Venturini G, Krishna A, Chakravarti A, Rivolta C, Bhattacharya SS. Rose AM, et al. Among authors: chakravarti a. Sci Rep. 2016 Jan 19;6:19450. doi: 10.1038/srep19450. Sci Rep. 2016. PMID: 26781568 Free PMC article.

2

MSR1 repeats modulate gene expression and affect risk of breast and prostate cancer.

Rose AM, Krishan A, Chakarova CF, Moya L, Chambers SK, Hollands M, Illingworth JC, Williams SMG, McCabe HE, Shah AZ, Palmer CNA, Chakravarti A, Berg JN, Batra J, Bhattacharya SS. Rose AM, et al. Among authors: chakravarti a. Ann Oncol. 2018 May 1;29(5):1292-1303. doi: 10.1093/annonc/mdy082. Ann Oncol. 2018. PMID: 29509840 Free article.

3

Allele-specific expression in the germline of patients with familial pancreatic cancer: an unbiased approach to cancer gene discovery.

Tan AC, Fan JB, Karikari C, Bibikova M, Garcia EW, Zhou L, Barker D, Serre D, Feldmann G, Hruban RH, Klein AP, Goggins M, Couch FJ, Hudson TJ, Winslow RL, Maitra A, Chakravarti A. Tan AC, et al. Among authors: chakravarti a. Cancer Biol Ther. 2008 Jan;7(1):135-44. doi: 10.4161/cbt.7.1.5199. Epub 2007 Oct 19. Cancer Biol Ther. 2008. PMID: 18059179 Free PMC article.

4

Discrepancies in dbSNP confirmation rates and allele frequency distributions from varying genotyping error rates and patterns.

Mitchell AA, Zwick ME, Chakravarti A, Cutler DJ. Mitchell AA, et al. Among authors: chakravarti a. Bioinformatics. 2004 May 1;20(7):1022-32. doi: 10.1093/bioinformatics/bth034. Epub 2004 Feb 5. Bioinformatics. 2004. PMID: 14764571

5

A common sex-dependent mutation in a RET enhancer underlies Hirschsprung disease risk.

Emison ES, McCallion AS, Kashuk CS, Bush RT, Grice E, Lin S, Portnoy ME, Cutler DJ, Green ED, Chakravarti A. Emison ES, et al. Among authors: chakravarti a. Nature. 2005 Apr 14;434(7035):857-63. doi: 10.1038/nature03467. Nature. 2005. PMID: 15829955

6

Genomic alterations in cultured human embryonic stem cells.

Maitra A, Arking DE, Shivapurkar N, Ikeda M, Stastny V, Kassauei K, Sui G, Cutler DJ, Liu Y, Brimble SN, Noaksson K, Hyllner J, Schulz TC, Zeng X, Freed WJ, Crook J, Abraham S, Colman A, Sartipy P, Matsui S, Carpenter M, Gazdar AF, Rao M, Chakravarti A. Maitra A, et al. Among authors: chakravarti a. Nat Genet. 2005 Oct;37(10):1099-103. doi: 10.1038/ng1631. Epub 2005 Sep 4. Nat Genet. 2005. PMID: 16142235

7

Population bottlenecks as a potential major shaping force of human genome architecture.

Gherman A, Chen PE, Teslovich TM, Stankiewicz P, Withers M, Kashuk CS, Chakravarti A, Lupski JR, Cutler DJ, Katsanis N. Gherman A, et al. Among authors: chakravarti a. PLoS Genet. 2007 Jul;3(7):e119. doi: 10.1371/journal.pgen.0030119. PLoS Genet. 2007. PMID: 17658953 Free PMC article.

8

Evaluation of the RET regulatory landscape reveals the biological relevance of a HSCR-implicated enhancer.

Grice EA, Rochelle ES, Green ED, Chakravarti A, McCallion AS. Grice EA, et al. Among authors: chakravarti a. Hum Mol Genet. 2005 Dec 15;14(24):3837-45. doi: 10.1093/hmg/ddi408. Epub 2005 Nov 3. Hum Mol Genet. 2005. PMID: 16269442

9

Undetected genotyping errors cause apparent overtransmission of common alleles in the transmission/disequilibrium test.

Mitchell AA, Cutler DJ, Chakravarti A. Mitchell AA, et al. Among authors: chakravarti a. Am J Hum Genet. 2003 Mar;72(3):598-610. doi: 10.1086/368203. Epub 2003 Feb 13. Am J Hum Genet. 2003. PMID: 12587097 Free PMC article.

10

Phenotype variation in two-locus mouse models of Hirschsprung disease: tissue-specific interaction between Ret and Ednrb.

McCallion AS, Stames E, Conlon RA, Chakravarti A. McCallion AS, et al. Among authors: chakravarti a. Proc Natl Acad Sci U S A. 2003 Feb 18;100(4):1826-31. doi: 10.1073/pnas.0337540100. Epub 2003 Feb 6. Proc Natl Acad Sci U S A. 2003. PMID: 12574515 Free PMC article.

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