Macklin P - Search Results

1

BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations.

Ghaffarizadeh A, Friedman SH, Macklin P. Ghaffarizadeh A, et al. Among authors: macklin p. Bioinformatics. 2016 Apr 15;32(8):1256-8. doi: 10.1093/bioinformatics/btv730. Epub 2015 Dec 12. Bioinformatics. 2016. PMID: 26656933 Free PMC article.

2

Progress Towards Computational 3-D Multicellular Systems Biology.

Macklin P, Frieboes HB, Sparks JL, Ghaffarizadeh A, Friedman SH, Juarez EF, Jonckheere E, Mumenthaler SM. Macklin P, et al. Adv Exp Med Biol. 2016;936:225-246. doi: 10.1007/978-3-319-42023-3_12. Adv Exp Med Biol. 2016. PMID: 27739051 Free PMC article. Review.

3

PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems.

Ghaffarizadeh A, Heiland R, Friedman SH, Mumenthaler SM, Macklin P. Ghaffarizadeh A, et al. Among authors: macklin p. PLoS Comput Biol. 2018 Feb 23;14(2):e1005991. doi: 10.1371/journal.pcbi.1005991. eCollection 2018 Feb. PLoS Comput Biol. 2018. PMID: 29474446 Free PMC article.

4

High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow.

Ozik J, Collier N, Wozniak JM, Macal C, Cockrell C, Friedman SH, Ghaffarizadeh A, Heiland R, An G, Macklin P. Ozik J, et al. Among authors: macklin p. BMC Bioinformatics. 2018 Dec 21;19(Suppl 18):483. doi: 10.1186/s12859-018-2510-x. BMC Bioinformatics. 2018. PMID: 30577742 Free PMC article.

5

Quantifying differences in cell line population dynamics using CellPD.

Juarez EF, Lau R, Friedman SH, Ghaffarizadeh A, Jonckheere E, Agus DB, Mumenthaler SM, Macklin P. Juarez EF, et al. Among authors: macklin p. BMC Syst Biol. 2016 Sep 21;10(1):92. doi: 10.1186/s12918-016-0337-5. BMC Syst Biol. 2016. PMID: 27655224 Free PMC article.

6

High-throughput microscopy reveals the impact of multifactorial environmental perturbations on colorectal cancer cell growth.

Chiang CT, Lau R, Ghaffarizadeh A, Brovold M, Vyas D, Juárez EF, Atala A, Agus DB, Soker S, Macklin P, Ruderman D, Mumenthaler SM. Chiang CT, et al. Among authors: macklin p. Gigascience. 2021 Apr 19;10(4):giab026. doi: 10.1093/gigascience/giab026. Gigascience. 2021. PMID: 33871006 Free PMC article.

7

OrgDyn: feature- and model-based characterization of spatial and temporal organoid dynamics.

Hasnain Z, Fraser AK, Georgess D, Choi A, Macklin P, Bader JS, Peyton SR, Ewald AJ, Newton PK. Hasnain Z, et al. Among authors: macklin p. Bioinformatics. 2020 May 1;36(10):3292-3294. doi: 10.1093/bioinformatics/btaa096. Bioinformatics. 2020. PMID: 32091578 Free PMC article.

8

The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.

HuBMAP Consortium. HuBMAP Consortium. Nature. 2019 Oct;574(7777):187-192. doi: 10.1038/s41586-019-1629-x. Epub 2019 Oct 9. Nature. 2019. PMID: 31597973 Free PMC article.

9

PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling.

Letort G, Montagud A, Stoll G, Heiland R, Barillot E, Macklin P, Zinovyev A, Calzone L. Letort G, et al. Among authors: macklin p. Bioinformatics. 2019 Apr 1;35(7):1188-1196. doi: 10.1093/bioinformatics/bty766. Bioinformatics. 2019. PMID: 30169736 Free PMC article.

10

Agent-Based Modeling of Cancer Stem Cell Driven Solid Tumor Growth.

Poleszczuk J, Macklin P, Enderling H. Poleszczuk J, et al. Among authors: macklin p. Methods Mol Biol. 2016;1516:335-346. doi: 10.1007/7651_2016_346. Methods Mol Biol. 2016. PMID: 27044046 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

79 results

Search Page