Kohlbacher O - Search Results

1

Immunoinformatics and epitope prediction in the age of genomic medicine.

Backert L, Kohlbacher O. Backert L, et al. Among authors: kohlbacher o. Genome Med. 2015 Nov 20;7:119. doi: 10.1186/s13073-015-0245-0. Genome Med. 2015. PMID: 26589500 Free PMC article. Review.

2

A mathematical framework for the selection of an optimal set of peptides for epitope-based vaccines.

Toussaint NC, Dönnes P, Kohlbacher O. Toussaint NC, et al. Among authors: kohlbacher o. PLoS Comput Biol. 2008 Dec;4(12):e1000246. doi: 10.1371/journal.pcbi.1000246. Epub 2008 Dec 26. PLoS Comput Biol. 2008. PMID: 19112482 Free PMC article.

3

FRED--a framework for T-cell epitope detection.

Feldhahn M, Dönnes P, Thiel P, Kohlbacher O. Feldhahn M, et al. Among authors: kohlbacher o. Bioinformatics. 2009 Oct 15;25(20):2758-9. doi: 10.1093/bioinformatics/btp409. Epub 2009 Jul 4. Bioinformatics. 2009. PMID: 19578173 Free PMC article.

4

miHA-Match: computational detection of tissue-specific minor histocompatibility antigens.

Feldhahn M, Dönnes P, Schubert B, Schilbach K, Rammensee HG, Kohlbacher O. Feldhahn M, et al. Among authors: kohlbacher o. J Immunol Methods. 2012 Dec 14;386(1-2):94-100. doi: 10.1016/j.jim.2012.09.004. Epub 2012 Sep 14. J Immunol Methods. 2012. PMID: 22985828

5

OptiType: precision HLA typing from next-generation sequencing data.

Szolek A, Schubert B, Mohr C, Sturm M, Feldhahn M, Kohlbacher O. Szolek A, et al. Among authors: kohlbacher o. Bioinformatics. 2014 Dec 1;30(23):3310-6. doi: 10.1093/bioinformatics/btu548. Epub 2014 Aug 20. Bioinformatics. 2014. PMID: 25143287 Free PMC article.

6

EpiToolKit--a web-based workbench for vaccine design.

Schubert B, Brachvogel HP, Jürges C, Kohlbacher O. Schubert B, et al. Among authors: kohlbacher o. Bioinformatics. 2015 Jul 1;31(13):2211-3. doi: 10.1093/bioinformatics/btv116. Epub 2015 Feb 20. Bioinformatics. 2015. PMID: 25712691 Free PMC article.

7

The antigenic landscape of multiple myeloma: mass spectrometry (re)defines targets for T-cell-based immunotherapy.

Walz S, Stickel JS, Kowalewski DJ, Schuster H, Weisel K, Backert L, Kahn S, Nelde A, Stroh T, Handel M, Kohlbacher O, Kanz L, Salih HR, Rammensee HG, Stevanović S. Walz S, et al. Among authors: kohlbacher o. Blood. 2015 Sep 3;126(10):1203-13. doi: 10.1182/blood-2015-04-640532. Epub 2015 Jul 2. Blood. 2015. PMID: 26138685 Free PMC article.

8

Testing and Validation of Computational Methods for Mass Spectrometry.

Gatto L, Hansen KD, Hoopmann MR, Hermjakob H, Kohlbacher O, Beyer A. Gatto L, et al. Among authors: kohlbacher o. J Proteome Res. 2016 Mar 4;15(3):809-14. doi: 10.1021/acs.jproteome.5b00852. Epub 2015 Nov 17. J Proteome Res. 2016. PMID: 26549429 Free PMC article.

9

Designing string-of-beads vaccines with optimal spacers.

Schubert B, Kohlbacher O. Schubert B, et al. Among authors: kohlbacher o. Genome Med. 2016 Jan 26;8(1):9. doi: 10.1186/s13073-016-0263-6. Genome Med. 2016. PMID: 26813686 Free PMC article.

10

Carfilzomib alters the HLA-presented peptidome of myeloma cells and impairs presentation of peptides with aromatic C-termini.

Kowalewski DJ, Walz S, Backert L, Schuster H, Kohlbacher O, Weisel K, Rittig SM, Kanz L, Salih HR, Rammensee HG, Stevanović S, Stickel JS. Kowalewski DJ, et al. Among authors: kohlbacher o. Blood Cancer J. 2016 Apr 8;6(4):e411. doi: 10.1038/bcj.2016.14. Blood Cancer J. 2016. PMID: 27058226 Free PMC article.

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