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Discovering Gene Regulatory Elements Using Coverage-Based Heuristics.
Al-Ouran R, Schmidt R, Naik A, Jones J, Drews F, Juedes D, Elnitski L, Welch L. Al-Ouran R, et al. Among authors: elnitski l. IEEE/ACM Trans Comput Biol Bioinform. 2018 Jul-Aug;15(4):1290-1300. doi: 10.1109/TCBB.2015.2496261. Epub 2015 Oct 30. IEEE/ACM Trans Comput Biol Bioinform. 2018. PMID: 26540692
WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures.
Lichtenberg J, Kurz K, Liang X, Al-ouran R, Neiman L, Nau LJ, Welch JD, Jacox E, Bitterman T, Ecker K, Elnitski L, Drews F, Lee SS, Welch LR. Lichtenberg J, et al. Among authors: elnitski l. BMC Bioinformatics. 2010 Dec 21;11 Suppl 12(Suppl 12):S6. doi: 10.1186/1471-2105-11-S12-S6. BMC Bioinformatics. 2010. PMID: 21210985 Free PMC article.
Word-based characterization of promoters involved in human DNA repair pathways.
Lichtenberg J, Jacox E, Welch JD, Kurz K, Liang X, Yang MQ, Drews F, Ecker K, Lee SS, Elnitski L, Welch LR. Lichtenberg J, et al. Among authors: elnitski l. BMC Genomics. 2009 Jul 7;10 Suppl 1(Suppl 1):S18. doi: 10.1186/1471-2164-10-S1-S18. BMC Genomics. 2009. PMID: 19594877 Free PMC article.
Defining functional DNA elements in the human genome.
Kellis M, Wold B, Snyder MP, Bernstein BE, Kundaje A, Marinov GK, Ward LD, Birney E, Crawford GE, Dekker J, Dunham I, Elnitski LL, Farnham PJ, Feingold EA, Gerstein M, Giddings MC, Gilbert DM, Gingeras TR, Green ED, Guigo R, Hubbard T, Kent J, Lieb JD, Myers RM, Pazin MJ, Ren B, Stamatoyannopoulos JA, Weng Z, White KP, Hardison RC. Kellis M, et al. Among authors: elnitski ll. Proc Natl Acad Sci U S A. 2014 Apr 29;111(17):6131-8. doi: 10.1073/pnas.1318948111. Epub 2014 Apr 21. Proc Natl Acad Sci U S A. 2014. PMID: 24753594 Free PMC article. Review.
83 results