Valencia A - Search Results

1

Predicting Protein Relationships to Human Pathways through a Relational Learning Approach Based on Simple Sequence Features.

García-Jiménez B, Pons T, Sanchis A, Valencia A. García-Jiménez B, et al. Among authors: valencia a. IEEE/ACM Trans Comput Biol Bioinform. 2014 Jul-Aug;11(4):753-65. doi: 10.1109/TCBB.2014.2318730. IEEE/ACM Trans Comput Biol Bioinform. 2014. PMID: 26356345

2

Beta-propellers: associated functions and their role in human diseases.

Pons T, Gómez R, Chinea G, Valencia A. Pons T, et al. Among authors: valencia a. Curr Med Chem. 2003 Mar;10(6):505-24. doi: 10.2174/0929867033368204. Curr Med Chem. 2003. PMID: 12570695 Review.

3

Predicting functional residues in Plasmodium falciparum plasmepsins by combining sequence and structural analysis with molecular dynamics simulations.

Valiente PA, Batista PR, Pupo A, Pons T, Valencia A, Pascutti PG. Valiente PA, et al. Among authors: valencia a. Proteins. 2008 Nov 1;73(2):440-57. doi: 10.1002/prot.22068. Proteins. 2008. PMID: 18442137

4

Inference of functional relations in predicted protein networks with a machine learning approach.

García-Jiménez B, Juan D, Ezkurdia I, Andrés-León E, Valencia A. García-Jiménez B, et al. Among authors: valencia a. PLoS One. 2010 Apr 1;5(4):e9969. doi: 10.1371/journal.pone.0009969. PLoS One. 2010. PMID: 20376314 Free PMC article.

5

Towards a detailed atlas of protein-protein interactions.

Mosca R, Pons T, Céol A, Valencia A, Aloy P. Mosca R, et al. Among authors: valencia a. Curr Opin Struct Biol. 2013 Dec;23(6):929-40. doi: 10.1016/j.sbi.2013.07.005. Epub 2013 Jul 26. Curr Opin Struct Biol. 2013. PMID: 23896349 Review.

6

A common structural scaffold in CTD phosphatases that supports distinct catalytic mechanisms.

Pons T, Paramonov I, Boullosa C, Ibáñez K, Rojas AM, Valencia A. Pons T, et al. Among authors: valencia a. Proteins. 2014 Jan;82(1):103-18. doi: 10.1002/prot.24376. Epub 2013 Sep 10. Proteins. 2014. PMID: 23900790

7

Structure-PPi: a module for the annotation of cancer-related single-nucleotide variants at protein-protein interfaces.

Vázquez M, Valencia A, Pons T. Vázquez M, et al. Among authors: valencia a. Bioinformatics. 2015 Jul 15;31(14):2397-9. doi: 10.1093/bioinformatics/btv142. Epub 2015 Mar 11. Bioinformatics. 2015. PMID: 25765346 Free PMC article.

8

POLE and POLD1 mutations in 529 kindred with familial colorectal cancer and/or polyposis: review of reported cases and recommendations for genetic testing and surveillance.

Bellido F, Pineda M, Aiza G, Valdés-Mas R, Navarro M, Puente DA, Pons T, González S, Iglesias S, Darder E, Piñol V, Soto JL, Valencia A, Blanco I, Urioste M, Brunet J, Lázaro C, Capellá G, Puente XS, Valle L. Bellido F, et al. Among authors: valencia a. Genet Med. 2016 Apr;18(4):325-32. doi: 10.1038/gim.2015.75. Epub 2015 Jul 2. Genet Med. 2016. PMID: 26133394 Free PMC article. Review.

9

wKinMut-2: Identification and Interpretation of Pathogenic Variants in Human Protein Kinases.

Vazquez M, Pons T, Brunak S, Valencia A, Izarzugaza JM. Vazquez M, et al. Among authors: valencia a. Hum Mutat. 2016 Jan;37(1):36-42. doi: 10.1002/humu.22914. Epub 2015 Oct 20. Hum Mutat. 2016. PMID: 26443060

10

KinMutRF: a random forest classifier of sequence variants in the human protein kinase superfamily.

Pons T, Vazquez M, Matey-Hernandez ML, Brunak S, Valencia A, Izarzugaza JM. Pons T, et al. Among authors: valencia a. BMC Genomics. 2016 Jun 23;17 Suppl 2(Suppl 2):396. doi: 10.1186/s12864-016-2723-1. BMC Genomics. 2016. PMID: 27357839 Free PMC article.

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